Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1271 ATGGCGACTACCCCATCGGTGCCACTGTTGAAAGATGAGCTTGACATCGTGATCCCCACGATCCGCAACCTTGACTTCTTGGAGATGTGGAGGCCCTTCTTCCAGGGCTACCATCTCATCATCGTTCAGGATGGTGACCCATCGAAGACCATCAACGTCCCTGAAGGCTTCGATTACGAGCTCTACAACCGCAACGACATCAACAGGATCTTGGGTCCTAAAGCCTCCTGCATCTCCTTCAAGGACTCCGCTTGCCGCTGCTTCGGTTACATGGTGTCGAAGAAGAAGTATGTCTACACCATCGATGATGACTGCTTTGTTGCTAAGGACCCATCTGGCAAGGACATCAATGCACTTGAGCAGCACATTAAGAATCTGCTTACTCCATCCACTCCACATTTCTTCAACACCCTTTATGATCCTTACAGGGAAGGTGCTGATTTCGTGCGTGGATACCCTTTCAGTCTCCGTGAAGGTGCCCCCACTGCTGTTTCTCATGGCCTTTGGCTCAACATTCCTGACTATGATGCTCCAACACAGCTTGTCAAGCCCCGTGAGAGGAACACCAGGTATGTTGATGCGGTTATGACCATTCCCAAAGGAACATTGTTCCCCATGTGCGGTATGAATCTGGCCTTCGACCGCCAGCTGATTGGACCTGCAATGTACTTTGGACTCATGGGTGATGGCCAGCCTATTGGACGATACGATGATATGTGGGCTGGGTGGTGCATTAAGGTTATCTGTGACCATTTGGGCCTGGGAGTCAAGACTGGTCTTCCATACATATGGCACAGCAAAGCAAGCAACCCGTTTGTTAACCTCAAGAAGGAGTACAAAGGCATCTTCTGGCAAGAAGAGATCATTCCATTTTTCCAATCTGCTACCCTTCCAAAAGACTGCACCTCTGTTCAAAAGTGCTACATTGAACTCTCCAAGCAAGTCAAGGAGAAGCTTGGCCCTGTTGATCCCTATTTCAACAAGCTAGGCGATGCTATGGTCACCTGGATTGAAGCTTGGGATGAGCTTAACAACTCGTCTGAAGAGGTCTCTTCAAAGCCTAATGGGGCTGCTGCCAAGTGA 1083 0.4949 MATTPSVPLLKDELDIVIPTIRNLDFLEMWRPFFQGYHLIIVQDGDPSKTINVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYVYTIDDDCFVAKDPSGKDINALEQHIKNLLTPSTPHFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVMTIPKGTLFPMCGMNLAFDRQLIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQSATLPKDCTSVQKCYIELSKQVKEKLGPVDPYFNKLGDAMVTWIEAWDELNNSSEEVSSKPNGAAAK* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1271 360 Pfam Reversibly glycosylated polypeptide 10 344 IPR037595 -
Lja2g1271 360 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 5 353 - -
Lja2g1271 360 SUPERFAMILY Nucleotide-diphospho-sugar transferases 35 243 IPR029044 -
Lja2g1271 360 PIRSF UPTG 4 348 IPR004901 GO:0016866|GO:0071669
Lja2g1271 360 PANTHER UDP-ARABINOSE MUTASE 5 353 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1271 Lja-Chr2 12081199 12084849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1271 K13379 - gmx:100788017 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1271 2 12081199 12084849 Lja2g1271 2 12081199 12084849 ECH