LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja2g1268	ATGTCAATACCAGAAATAGTGTGTTTTGTGCTGGTTTTGGCATTTTGTGCATTCTTTCTAGTGCTGAAATATTGGAATGAGGTAAGGTACAGTAGGAAAGGAATGCCACCAGGAACTATGGGTTGGCCTATTTTTGGTGAGACTGCAGGGTTTCTCAAACAAGGACCAGATTTCATGAAAGGCAAGAGAGCAAGGTATGGAAATCTCTTCAAGACTCATGCATTAGGCTCTCCTGTTGTTATCAGCATGGATCCAGAACTAAACAGATTCATCCTCCAGAACGAAGCAAATGGTCTAGTTCCTGGTTACCCTGTGTCCATGAGGAATATACTTGGGAAAGGAAACATTGCTGAAGTTCATGGTGCTCTTCATAAACGCATTAGAGGGTCAATATTATCATTCATTGGTCCTGCTGCAATTAGAAATCATCATTTGCAAGAAATTGACAGATTTATGCAGTCTTTCCTTGACAACTGGGATGGTAAAACTATTGATATTCAGCAAAAAACCAAACAGATGGCATTCTTTGTATCAATGAAACTTATTGTAGAAAATGAAACAAGTCCTTTCCCTGAGACCTTCAAAGCTACATTTGACAACATAGTGTCAGGAACATTTTCATTGCCTATTAAAATTCCTGGAACCAACTACTTTCGAGGACTTCAGACAAGGAAAAAAGTGGTTGGGATCCTTAAAGAGATTTTAACCAAAAGAAGATCTTCTTTGGCCGCTCATGCTGACATTCTTGATCAACTCATGAGAAATGAGGACCTTACATACAAACTTACTGATGAACAAATAATTGATCAGATAATCACATTCTTATACTCAGGTTATGAAACTGTATCAACTGCTACAATGATGGCTGTCAAATATCTCCATGATAATTATAGAGTTCTTGAAGAAGTAAGGGAAGAGCATTTTGCAATCCAGCAAAGAAAGAGACCAGAGGATGTAGTAAGCTGGGATGACTATAAGCGTATGGTTTATACTCGTGCGGTAATTTTTGAAACATTGAGATTTGCTAACATTGTTAATGGGGTGTTGAGGAAGACCACCAAAGACGTTGAACTGAATGGATTTACCATTCCTCAGGGATGGAGAGTTTATGTGTACACAAGGGAGACCAATTGTGATTCCATTCTCTATCCAGAGCCTTTTAATTTTAACCCCTCCAGATGGCTGGTGGGAAGTAGAGAGAAACAATCTCCTGAAATTCCCGAGAGTTGA	1230	0.3894	MSIPEIVCFVLVLAFCAFFLVLKYWNEVRYSRKGMPPGTMGWPIFGETAGFLKQGPDFMKGKRARYGNLFKTHALGSPVVISMDPELNRFILQNEANGLVPGYPVSMRNILGKGNIAEVHGALHKRIRGSILSFIGPAAIRNHHLQEIDRFMQSFLDNWDGKTIDIQQKTKQMAFFVSMKLIVENETSPFPETFKATFDNIVSGTFSLPIKIPGTNYFRGLQTRKKVVGILKEILTKRRSSLAAHADILDQLMRNEDLTYKLTDEQIIDQIITFLYSGYETVSTATMMAVKYLHDNYRVLEEVREEHFAIQQRKRPEDVVSWDDYKRMVYTRAVIFETLRFANIVNGVLRKTTKDVELNGFTIPQGWRVYVYTRETNCDSILYPEPFNFNPSRWLVGSREKQSPEIPES*	410

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja2g1268	409	Pfam	Cytochrome P450	36	400	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja2g1268	409	SUPERFAMILY	Cytochrome P450	29	401	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja2g1268	409	PANTHER	CYTOCHROME P450 26	10	398	-	-
	Lja2g1268	409	PANTHER	CYTOCHROME P450 85A-LIKE	10	398	-	-
	Lja2g1268	409	Gene3D	Cytochrome P450	26	407	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja2g1268	409	PRINTS	E-class P450 group IV signature	377	395	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja2g1268	409	PRINTS	E-class P450 group IV signature	57	80	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja2g1268	409	PRINTS	E-class P450 group IV signature	328	344	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja2g1268	Lja-Chr2	12047659	12050751	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja2g1268	83	403	Cytochrome P450	AT5G38970	53.416	4.71e-122	357

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja2g1268	K09590		-	gmx:100818004	547.354

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja2g1268	2	12047659	12050751	Lja2g1268	2	12047659	12050751	ECH