Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1262 ATGGCGTGTCTCTCTTTTCCACAGTTTCTTTTACCTACCAGGTGCCAGGTGACATGGTCCTATTGTTATGCTTCTTTTAATGTAGTGAAGCTTGGGGAACTCAGGTCTAGGTGTAAATCTGGTCATGTGGCAATGGCAAGGAAGAAAGCAGCTTCTCTAGACTCTGTTGTAGAAGAACCCAGTGAAAATGAATCTGTTGTGGAAAAGAAGGCAACTAAAACTAAGAAGGCCACTGTGAGGAAAAAGAAAAAACCAGTAGCTGAGTCTCCTGAGGGGGATACTGATTTGTTGGTTGATGGAGATGACACCGATATTGTAGAAGGCTCGTCTCTCTCCAGTGCTGATTCTAAGAAGAAAACTCGAAAGACTCGAAGAAAAGATACGTCTAATTCTGCTGACTTGGAAGAAGAGAAGGAGCTCAAGGAAGAGAAAAAGGTTAGTAGAAGAGGAAGGAAACCTAAAGAGGAGAACATAGTTTTAGAGGATAAAATTGATGAGGTTGAGGTCAATGACCAAGATGAGCCTTCATTTATTGATCACGTGGAGGATGAGAGTGACGTCGGCTTGGAACTGATAAAAGACGATGGAGAGGACATTAGCTTTACTTATGGTTGGCCTCCCCTTGTTTGTTGCTTTGGATCTGCACAGCATGCTTTTGTGCCTTCAGGGAGGCCTTCCAATAGGCTTATAAATCATGAAATCCATGAAACAATGCAGGAAACCCTGTGGAGCCCTGAAAAATTTGTTAGGGCTCCTGGGGGCTCTGCTGGTAGTGTTGCCATTGCTCTTGCAAGCTTGGGTGGCAAGGTTGCTTTCATGGGAAAACTTGCAGATGATGAATATGGTCAAGCAATGTTGTACTATATGAATGTAAATAATGTTCAAACCCGATCAGTCTGTATTGATGGTAAAAGGGCAACAGCCGTATCACAGATGAAGATTGGTAAACGGAGTCGACTTAAAATGAGTTGTATAAAACCATGTGCTGAAGATTGCTTGACAAAGTCAGAGATAAATATGGATGTGATGAAAGAGACAAAAATGTTCTACTTCAACACTCATTCCCTGCTTGATCGTAACATGAGATCAACTACAATGCAAGCCATTAAGATTGCAAAGCATTTTGGAGCGGTTGTTTTCTACGATTTAAACCTTCCTATGCCATTATGGCACTCTCTGGAAGAAACTAAGATGTTCATTCAGCAAGCGTGGAATCTTGCAGACATTATTGAGGTCACTAAGCAAGAACTGGAGTTCTTATGTGGGATCACACCATCTGAAGAATTTGACACAAAAAATAATGCCAGGTCAAAGTTTGTCCATTATGAACCTGAAGTGATTGCACCACTATGGCATGAAAATCTCAAGGTTTTGTTTGTGACTAATGGAACTTCCAAGATACATTACTACACTAGTGAGCTCGATGGTGCTGTTAGTGGGATGGAGGATCCCCCGATTACCCCTTTCACTTCTGATATGTCAGCAACTGGAGATGGCATTGTTGCAGCTATCATGCGGATGCTGTCAGTTCAACCTGAATTGATAACTGATAAAGGGTACCTGGAGCATACCATTAAGTACGCAATTGATTGTGGTGTTATAGATCAATGGATCCTCGGCCGAGTACGTGGCTTTCCTCCACGTGAAGATATGGAGGATGTTACTCCTGATCCTTATGGTATAAAGTCAATTACAGAAACAGAGTACCGCACGGTGTTAGAACCTGTTAGTTAA 1734 0.421 MACLSFPQFLLPTRCQVTWSYCYASFNVVKLGELRSRCKSGHVAMARKKAASLDSVVEEPSENESVVEKKATKTKKATVRKKKKPVAESPEGDTDLLVDGDDTDIVEGSSLSSADSKKKTRKTRRKDTSNSADLEEEKELKEEKKVSRRGRKPKEENIVLEDKIDEVEVNDQDEPSFIDHVEDESDVGLELIKDDGEDISFTYGWPPLVCCFGSAQHAFVPSGRPSNRLINHEIHETMQETLWSPEKFVRAPGGSAGSVAIALASLGGKVAFMGKLADDEYGQAMLYYMNVNNVQTRSVCIDGKRATAVSQMKIGKRSRLKMSCIKPCAEDCLTKSEINMDVMKETKMFYFNTHSLLDRNMRSTTMQAIKIAKHFGAVVFYDLNLPMPLWHSLEETKMFIQQAWNLADIIEVTKQELEFLCGITPSEEFDTKNNARSKFVHYEPEVIAPLWHENLKVLFVTNGTSKIHYYTSELDGAVSGMEDPPITPFTSDMSATGDGIVAAIMRMLSVQPELITDKGYLEHTIKYAIDCGVIDQWILGRVRGFPPREDMEDVTPDPYGIKSITETEYRTVLEPVS* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1262 577 Pfam pfkB family carbohydrate kinase 239 510 IPR011611 -
Lja2g1262 577 Gene3D - 209 557 IPR029056 -
Lja2g1262 577 MobiDBLite consensus disorder prediction 51 151 - -
Lja2g1262 577 CDD bac_FRK 208 542 - -
Lja2g1262 577 MobiDBLite consensus disorder prediction 126 151 - -
Lja2g1262 577 PANTHER HEXOKINASE FAMILY MEMBER 108 573 - -
Lja2g1262 577 PANTHER FRUCTOKINASE-LIKE 2, CHLOROPLASTIC 108 573 - -
Lja2g1262 577 SUPERFAMILY Ribokinase-like 209 553 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1262 Lja-Chr2 11999516 12003272 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1262 - - aprc:113868853 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1262 2 11999516 12003272 Lja2g1262 2 11999516 12003272 ECH