Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1261 ATGGCTCTTTCGGATGGTGATAATAAGATTAGACGTGAGTTGAGGATTCATGAACGTTTGGATGACCTGAGGGCTGATTTGGCAGACTATATTGCTGAAATATCGGACGCGTCCGTGCAGGCGCGGGGAGTCTTTTCCATTGCTATATCTGGTGGTTCTCTCATTGGCTTATTGGGAAAACTCTTGGAAGCTCCTTATAATAAGATAATGGACTGGTCCAAGTGGTATGTCTTCTGGGCTGATGAACGTGTTGTCGCGAAAGACCATGCTGATAGCAATTATAAGCTTGCTAGAGATGGACTTTTGTCTAAGGTGCCTGTCATCTCCAGTCACGTGAATTCTATTAATGATTCCGTATCAGCAGAAGAAGCTGCAGATGATTATGAGTTTGTCATCCGACAATTAGTGAAAACCCGTGTTGTCAGCGTGTCTGAGGTCAGTGACTGCCCAAAGTTTGATCTCATTCTGCTTGGATTGGGTCCAGATGGCCATGTTGCCTCTTTATTTCCCAATCACTCAGCACTCAATGAAAGGGAAGTATGGGTAACTTTCGTTACTGACTCTCCCAAACCCCCACCTGAGAGAATCACATTTACCTTGCCTGTTATCAATTCTGCATCCAATGTAGCCGTGGTCGTCACAGGCGACAGCAAAGCAGAAGCTGTACACTTGGCAATAGATGATGTTGGACCTGACTACCCAGTAATACCAGCAAAAATGGTCCAACCAGCTACTGGGAAGTTGGTGTGGTTTTTGGATAACCTGGCTGCCTCAAAACTTGATGATTCCAGTTTAATCAAATAA 804 0.4478 MALSDGDNKIRRELRIHERLDDLRADLADYIAEISDASVQARGVFSIAISGGSLIGLLGKLLEAPYNKIMDWSKWYVFWADERVVAKDHADSNYKLARDGLLSKVPVISSHVNSINDSVSAEEAADDYEFVIRQLVKTRVVSVSEVSDCPKFDLILLGLGPDGHVASLFPNHSALNEREVWVTFVTDSPKPPPERITFTLPVINSASNVAVVVTGDSKAEAVHLAIDDVGPDYPVIPAKMVQPATGKLVWFLDNLAASKLDDSSLIK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1261 267 SUPERFAMILY NagB/RpiA/CoA transferase-like 14 261 IPR037171 -
Lja2g1261 267 PANTHER 6-PHOSPHOGLUCONOLACTONASE 1 262 IPR039104 -
Lja2g1261 267 PANTHER 6-PHOSPHOGLUCONOLACTONASE-RELATED 1 262 - -
Lja2g1261 267 Gene3D - 8 261 - -
Lja2g1261 267 Coils Coil 20 40 - -
Lja2g1261 267 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 21 250 IPR006148 GO:0005975
Lja2g1261 267 CDD 6PGL 21 252 IPR005900 GO:0005975|GO:0006098|GO:0017057
Lja2g1261 267 TIGRFAM pgl: 6-phosphogluconolactonase 17 260 IPR005900 GO:0005975|GO:0006098|GO:0017057
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1261 Lja-Chr2 11992980 11998224 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1261 K01057 - gmx:100809411 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1261 2 11992980 11998224 Lja2g1261 2 11992980 11998224 ECH