Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1253 ATGTCACAAGAGTTTCACCTTCTTCACTTCCATTATCTTCTTCAGCCACCATTTCTGAGCTTCCAAACTGCACTATGCCTATTCATCACCATCCTCGCCTTCCTCTACTGGCTTGCTCCTGGTGGGCTGGCTTGGGCCCTCAGCAAGTCCTCAGCCCGAACACTCATCCCAGGCCCATCCGGGCTTCTCAGCCTTTTCTCTAGCCCAACTCCGCACCGAGTCCTGGCTAAGCTCGCCAGGAGCTACCGTGCGGAGTCGCTGATGGCGTTCTCTGTTGGTCTAACCCGGTTCGTTATTTCCAGCGAACCGGAAACCGCTAAGGAGATTCTGGGAAGTACCGGTTTTGCTGATAGGCCGGTGAAGGAGTCTGCTTATGAGCTTCTGTTTCACAGAGCAATGGGGTTTGCTCCTTACGGCGAGTACTGGAGGAATCTCCGGAGAATCTCTGCTACTCACTTGTTCTGCCCCAGGAGGTTGTCAAGCTTTGGAAGCTTCAGGAGTGAGGTGGGGTTGAAGATGGTGGAGCGGTTAGCTGGTTTGATGGCGGAAACTGGTCGAGTTGAGGTGAAAAACGTGCTCCACTTCGGGTCGTTGAACAATGTGATGATGACGGTGTTTGGGAAGCGGTATGAATTTTTCGATGGTGAAGGTGTTGAGCTTGAGGAAATGGTGAGTGAAGGGTATGAGTTGTTGGGGGTGTTTAACTGGAGTGACCATTTTCCTGTTCTCGTGTGGTTGGACTTGCAGGGAGTGAGGAGAAGGTGCAGGGTTTTGGTTTCGAAGGTGAATGCGTTTGTTGGGAAAATCATTGAAGAGCATAGAGTGAAAAGAGTGTCTGGTGAATATGAGAAGGGAAGTGGAGTTGGTGATTTTGTTGATGTGTTGCTTGATTTGGAGAATAAGGACAAGCTCAGTGATTCTGATATGGTTGCAGTTCTCTGGGAAATGATTTTCAGAGGAACTGACACTGTTGCTATTACACTGGAATGGATTTTGGCTAGAATGGTTCTTCACCCTGAGATACAAGCAAAGGCACAAGAAGAGATTGAAGCTGTTGTTGGGAATTCAAGGCTTGTTTCTGATGATGACATTCCTAACCTTCGCTATTTGCAGTGCATTGTGAAGGAGGCACTGAGGGTGCACCCACCAGGGCCACTGCTATCATGGGCTCGCCTAGCGGTGCACGATGTCCACGTCGGTGATAAGCTTGTTCCCGCCGGCACCACCGCCATGGTTAACATGTGGGCCATCACACATGATGAGAAGGTGTGGGCGGAGCCAGAGGAGTTCAAGCCAGAGAGATTCATGGAGGAGGATGTGAGCATCATGGGGTCGGATTTGAGGCTTGCTCCCTTTGGTGCTGGGAGAAGAGTGTGTCCTGGGAAGGCCATGGGTTTGGCTTCTATTCATCTCTGGCTTGCTCAGTTGCTTCAGAGCTTCAAATGGGTTCCATGTGATGATTCCCCTGTTGATTTGACTGAGTACTTGAAACTCTCTATGGAGATGAAGACACCATTGGTGTGCAGGGTTATCCCTAGGGTTGATGCTTAA 1551 0.501 MSQEFHLLHFHYLLQPPFLSFQTALCLFITILAFLYWLAPGGLAWALSKSSARTLIPGPSGLLSLFSSPTPHRVLAKLARSYRAESLMAFSVGLTRFVISSEPETAKEILGSTGFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATHLFCPRRLSSFGSFRSEVGLKMVERLAGLMAETGRVEVKNVLHFGSLNNVMMTVFGKRYEFFDGEGVELEEMVSEGYELLGVFNWSDHFPVLVWLDLQGVRRRCRVLVSKVNAFVGKIIEEHRVKRVSGEYEKGSGVGDFVDVLLDLENKDKLSDSDMVAVLWEMIFRGTDTVAITLEWILARMVLHPEIQAKAQEEIEAVVGNSRLVSDDDIPNLRYLQCIVKEALRVHPPGPLLSWARLAVHDVHVGDKLVPAGTTAMVNMWAITHDEKVWAEPEEFKPERFMEEDVSIMGSDLRLAPFGAGRRVCPGKAMGLASIHLWLAQLLQSFKWVPCDDSPVDLTEYLKLSMEMKTPLVCRVIPRVDA* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1253 516 PANTHER CYTOCHROME P450 78A7-RELATED 1 513 - -
Lja2g1253 516 SUPERFAMILY Cytochrome P450 57 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1253 516 Gene3D Cytochrome P450 45 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1253 516 Pfam Cytochrome P450 68 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1253 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Lja2g1253 516 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1253 516 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1253 516 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1253 516 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1253 516 PANTHER CYTOCHROME P450 78A5 1 513 - -
Lja2g1253 516 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1253 516 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1253 516 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1253 516 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1253 516 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1253 516 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1253 516 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1253 Lja-Chr2 11853913 11855876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1253 1 513 Cytochrome P450 AT1G13710 65.451 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1253 K20619 - gmx:100804462 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1253 2 11853913 11855876 Lja2g1253 2 11853913 11855876 ECH