Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1247 ATGGGAGAATCCAAGTACATCTTCTTGGCATTTCTACTGGTTTGTTCAGAACTCCAAAGGGCATGTTCACATGGTGATCATCCTCTTTCAAAAGTTTCTGTTCATAAGGCAACAGTATCCCTTCTTGACCTTGCTCATATCAAAGCATCTCCATCACTTCTTGGACTACATGGACAAACTGCAGAGTGGGTCACTGTGGAGTATAGTTCTCCAATTCCATCAAATGATGATTGGATTGGAGTGTTCTCTCCTGCAAACTTCAGTGCTTCCACTTGTCCAAAAGAAAATAGTAGGGTTTTTCAACCACTGTTGTGTTCAGCGCCCATTAAGTATCAGTATGCAACTTACTCAAATCCCCAGTACAATGTAACTGGAAAAGGCCTTCTGAAGCTTCGGCTTATTAATCAAAGATCAGATTTCTCATTTGCACTGTTCTCTGGTGGCTTGTCAAATCCAACACTAGTGGCAGTGTCAAATAAAATAGCTTTTGCAAATCCAAAAGCACCGGTTTACCCTCGCCTGGCACTAGGGAAGTCATGGAACGAGATGACTGTAACATGGACAAGTGGATATGGCATCGGTGATGCTGAGCCTTTTGTTGAATGGGGTCCAAAAGGAGGGAATCATATACATTCACCTGCTGGGACACTCACTTTCACTCGTGATAGCTTATGTGGTTCACCAGCAAGAACTGTAGGATGGCGTGACCCTGGATTCATACACACCAGTTATCTGAAACAACTATGGCCCAACAGAATGTATGAGTACAAGATAGGACACAAGTTAAACAATGGTACATATATTTGGGGTGAAAATTATCAGTTTAGAGCAGCTCCTTTTCCTGGACAGAAATCTTTACAACGTGTAGTCATATTTGGTGATATGGGGAAGGAGGAAGTTGATGGTTCTAATGAATACAACAATTTCCAGCATGGCTCAATTAACACTACACAGCAGCTTATCCAGGACTTAGAAAACATTGACATGGTTTTCCATATTGGAGATATATCATATGCAAATGGATACCTTTCTCAATGGGATCAATTCACAGAACAAGTGGAGCCAATTGCATCAGCTGTGCCTTACATGATTGCAAGTGGGAACCATGAGAGAGACTGGCCTGGGACAGGGTCCTTTTATCAGAACATGGATTCTGGAGGAGAATGTGGTGTCTTGGCAGAGACTATGTTCTACGTCCCGGCTTCAAACAGGGCAAAGTTCTGGTATTCAATTGACTATGGCATGTTCCGCTTCTGTGTTGCTGACACTGAACATGATTGGAGAGAAGGAACAGAACAATACAAGTTCATTGAGCATTGTTTGGCATCAGTTGATAGACAAAAACAGCCATGGTTAATTTTCCTTGCACATAGGGTACTTGGTTACTCTTCTTGTATCAGTTATGCAGAAGATGGATCCTTTGGTGAACCAATGGGGCGAGAGAGCCTTCAAAAGCTATGGCAGAAATACAAGGTGGACATTGCCATCTATGGCCACGTGCATAACTATGAGAGGACCTGTCCCATATACCAGAATATCTGCACTAATGATGAGAAACACCATTATAAGGGAACCTTAAATGGGACCATACACATTGTTGCTGGTGGTGCTGGGGCATTCCTTTCAACATATACATCCCTCAAAACCAAATGGAGCATCTTTAAAGACTATGATTATGGTTTTGTAAAACTAACAGCATTGGATCATTCAAATTTGGTGTTTGAGTACAAGAAGAGCAGAGATGGCAAGGTTTATGACTCCTTCAAAATATCACGGGATTATAGAGACATCTTGGCCTGCACCATGGACAGTTGCTCGAGTGTAACACTGGCGTCTTGA 1839 0.4225 MGESKYIFLAFLLVCSELQRACSHGDHPLSKVSVHKATVSLLDLAHIKASPSLLGLHGQTAEWVTVEYSSPIPSNDDWIGVFSPANFSASTCPKENSRVFQPLLCSAPIKYQYATYSNPQYNVTGKGLLKLRLINQRSDFSFALFSGGLSNPTLVAVSNKIAFANPKAPVYPRLALGKSWNEMTVTWTSGYGIGDAEPFVEWGPKGGNHIHSPAGTLTFTRDSLCGSPARTVGWRDPGFIHTSYLKQLWPNRMYEYKIGHKLNNGTYIWGENYQFRAAPFPGQKSLQRVVIFGDMGKEEVDGSNEYNNFQHGSINTTQQLIQDLENIDMVFHIGDISYANGYLSQWDQFTEQVEPIASAVPYMIASGNHERDWPGTGSFYQNMDSGGECGVLAETMFYVPASNRAKFWYSIDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSCISYAEDGSFGEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNDEKHHYKGTLNGTIHIVAGGAGAFLSTYTSLKTKWSIFKDYDYGFVKLTALDHSNLVFEYKKSRDGKVYDSFKISRDYRDILACTMDSCSSVTLAS* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1247 612 Pfam Calcineurin-like phosphoesterase 288 503 IPR004843 GO:0016787
Lja2g1247 612 Pfam Purple acid Phosphatase, N-terminal domain 173 276 IPR015914 GO:0003993|GO:0046872
Lja2g1247 612 PANTHER PURPLE ACID PHOSPHATASE-RELATED 2 611 - -
Lja2g1247 612 Gene3D - 283 596 IPR029052 -
Lja2g1247 612 SUPERFAMILY Metallo-dependent phosphatases 284 594 IPR029052 -
Lja2g1247 612 Pfam Iron/zinc purple acid phosphatase-like protein C 528 587 IPR025733 -
Lja2g1247 612 CDD MPP_PAPs 287 592 IPR041792 -
Lja2g1247 612 Pfam Fn3-like domain from Purple Acid Phosphatase 47 165 IPR040974 -
Lja2g1247 612 Gene3D - 168 281 - -
Lja2g1247 612 PANTHER PURPLE ACID PHOSPHATASE 2 611 - -
Lja2g1247 612 SUPERFAMILY Purple acid phosphatase, N-terminal domain 146 279 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1247 Lja-Chr2 11792693 11797823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1247 45 590 Miscellaneous Gene Families AT1G13900 30.233 3.84e-59 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1247 K22390 - gmx:100803398 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1247 2 11792693 11797823 Lja2g1247 2 11792693 11797823 ECH