Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1245 ATGGAAGCAGTGCCACCATCATCTACTTCATCTGTGTCCAATAAGAGTAAGACCATAACATTGGAAGAATGGAATGGTTCATCCCCCACAAAGCTCTCAAAGACTTTCACCATCAAAGCTTCTTCTTCCTCTGTCTCCATTCGAAGATCTGGTGCCCGCTTCACCCATGTTTGGAGACGATTACTTCAAGCATTTGTACCTGAGGGTTTCCCAAGCAGTGTGACTGCAGATTATGTTCCTTTTCAAATTTGGGATTTATTGCAGGGCCTTTCAACATATATAAGGACCATGCTTTCAACCCAGGCTCTCCTGAGTGCTATTGGGGTTGGTGAGAAATCAGCTACAGTCATCGGTGCCACTTTTCAGTGGTTTTTGAGGGACCTAACTGGCATGCTTGGAGGAATCTTATTCACATTCTACCAGGGATCAAATCTTGACAGCAATGCAAAAATGTGGCGCTTGGTTGCAGATCTTATGAATGATCTTGGGATGCTAATGGACCTCATTTCTCCATTGTATCCATCAGCTTTTGTGTTTGTTGTCTGCTTAGGAAGCATATCAAGATCTTTCACTGGTGTTGCAAGTGGTGCCACTAGAGCAGCTTTGACTCAGCATTTTGCTCTTCAGGATAATGCTGCAGATATATCTGCCAAGGAAGGAAGCCAGGAAACTGTAGCCACAATGATTGGCATGGCTTTGGGAATGCTTGTTGCTCGCATTACCATTGGACACCCGCTAGCCATTTGGTTTACTTTTTTATCTCTGACCCTGTTTCATATATATGCAAACTACCGAGCTGTTCGATGCCTGGCATTGACCTCGTTAAACCCGGAAAGAAGCTCTATTCTTTTGCACCATTTCATGGAGACTGGCCAAGTTCTCTCTCCTAAACAGGTCTCTTCACAGGAGCATGTTTTACCGATGCAGCTCACTTCATGGAGCTCAAAGAAAGCCTATTCCTTGGATAAGAAAGTACATTTAGGCACGAGGATTTCTTCATTTGATAACATGGAAATTAAGGAGCATCTGCTTTCTGCAGCATCGTACTACACAAAAGCCAAGTACTTACTAGTGGAAAGTAAAGGAATGATCAATGTTATTGTGCATAAAGATTCAAATGCTGCTGATGTCCTGAGGTCATTTGTCCATGCTCTTGTCCTGGCAAATAATGTTCATAAAAGCAAATCTTTGCATTCAGAAGGCCAAATGTGGATGGAAAATCAGTATGAAGTGTTTATTCAGAAGCTCAAGTCATTAGGTTGGAAAACAGAACGTCTTCTATCACCTATAATATGGAGAGCACACTGGATTTATGAACCGTTGGAAGAAAAAACTGATTAG 1341 0.4236 MEAVPPSSTSSVSNKSKTITLEEWNGSSPTKLSKTFTIKASSSSVSIRRSGARFTHVWRRLLQAFVPEGFPSSVTADYVPFQIWDLLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLISPLYPSAFVFVVCLGSISRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETVATMIGMALGMLVARITIGHPLAIWFTFLSLTLFHIYANYRAVRCLALTSLNPERSSILLHHFMETGQVLSPKQVSSQEHVLPMQLTSWSSKKAYSLDKKVHLGTRISSFDNMEIKEHLLSAASYYTKAKYLLVESKGMINVIVHKDSNAADVLRSFVHALVLANNVHKSKSLHSEGQMWMENQYEVFIQKLKSLGWKTERLLSPIIWRAHWIYEPLEEKTD* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1245 446 Pfam Vitamin B6 photo-protection and homoeostasis 55 291 IPR006968 -
Lja2g1245 446 PANTHER PROTEIN ROOT UVB SENSITIVE 3 9 446 - -
Lja2g1245 446 PANTHER RUS1 FAMILY PROTEIN C16ORF58 9 446 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1245 Lja-Chr2 11781565 11787345 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1245 - - gmx:100815127 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1245 2 11781565 11787345 Lja2g1245 2 11781565 11787345 ECH