Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1240 ATGGCCAAGTCGAAGAATCACACCGCTCACAACCAGTCCTACAAGGCACACAAGAACGACATCAAGAAGCCCAAGAGGCACCGCCACACTTCCACCAAAGGGATGGATCCTAAGTTTCTGACGAACCAGAGGTACGCGAGGAAGCACAACAAGAAGGGTGCCGAATCCGTTATTGAAGAAGAGTAA 186 0.5054 MAKSKNHTAHNQSYKAHKNDIKKPKRHRHTSTKGMDPKFLTNQRYARKHNKKGAESVIEEE* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1240 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 - -
Lja2g1240 61 Gene3D - 1 61 - -
Lja2g1240 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 IPR002673 GO:0003735|GO:0005840|GO:0006412
Lja2g1240 61 MobiDBLite consensus disorder prediction 1 61 - -
Lja2g1240 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1240 Lja-Chr2 11725315 11725500 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1240 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 78.689 5.52e-30 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1240 K02905 - jre:108994772 120.168