Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1238 ATGTTCGTTTCTCCCCCCCTGCTCTCCGCCGCGTGCCCCGTCGTCAGATGCAGCACCACCAACCGTAACAACCTTACAACGAGGCCTTTCAGGATTGTCGCTGATGCTGGGTTCCCTTCCTTTCTTCCCAGAGAGGTTGAGAGAATCGAAGACCCTTTTGCTCGAAAACTCGCCATGCGCATTCAGAGACTCCCTGTTCCTGTTAGTTTCGCCGAAAATCCCATCATGAGTAGTTGTGTGAAGCCATTGGTGCAGAGCAAGGAACCTCCAATTGTCCTTCTACATGGTTTTGACAGTTCATGTTTAGAATGGAGATACGGACATCCTCTGCTTGAAGAATCTGGATTTGAGACCTGGGCCATTGACATTCTTGGTTGGGGCTTCTGTGATTTAGAAAAACTTCCATCTTGTGATGTGGTATCAAAGCGTGATCACTTCTATCAGTTTTGGAAGTCCTATATCAGAAGGCCAATGATATTGGTTGGACCAAGCCTTGGCTCTGCTGTTGCGATTGACTTTTCAGTCAATTATCCAGAAGCTGTGGAAAAGCTTGTTCTGATGGATGCTAGTGTATATGCAAAGGGAACTGGGAGCCTAGCAACCTTACCAAGATCGGTTGCCTATGCCGGGGTATCTTTATTGAAGAGCATTCCATTACGCTTTTATGCCAACTATCTGACTTTCACCAACACGTCCTTCCGCACCAGCCTTGATTCGGTTAATGTGGGTCGCTTGCATTGTTTATTACCTTGGTGGGATGATGCTACTGTGGATTTTATGACTAGTGGTGGTTACAATGTTGGTTCCCTGATAAGAAAGGTAAAGCAGAAAACACTGATAATATGGGGTGAAAATGACCGCATCATCAGCAATAAGCTTGCAGTGCAACTACACTGTGAATTACCTGATGCAATTTTACGCCAAATACCCGATTGTGGGCATCTTCCTCATTTGGAAAAACCAGATTCTACCATCAAATTAATTGTTGAATTTATGAAGAAAGAGACCAAGAAGTTAAGTGAATGTGTTTCACAAGTATGA 1041 0.4457 MFVSPPLLSAACPVVRCSTTNRNNLTTRPFRIVADAGFPSFLPREVERIEDPFARKLAMRIQRLPVPVSFAENPIMSSCVKPLVQSKEPPIVLLHGFDSSCLEWRYGHPLLEESGFETWAIDILGWGFCDLEKLPSCDVVSKRDHFYQFWKSYIRRPMILVGPSLGSAVAIDFSVNYPEAVEKLVLMDASVYAKGTGSLATLPRSVAYAGVSLLKSIPLRFYANYLTFTNTSFRTSLDSVNVGRLHCLLPWWDDATVDFMTSGGYNVGSLIRKVKQKTLIIWGENDRIISNKLAVQLHCELPDAILRQIPDCGHLPHLEKPDSTIKLIVEFMKKETKKLSECVSQV* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1238 346 PRINTS Alpha/beta hydrolase fold signature 115 130 IPR000073 -
Lja2g1238 346 PRINTS Alpha/beta hydrolase fold signature 160 173 IPR000073 -
Lja2g1238 346 PRINTS Alpha/beta hydrolase fold signature 278 292 IPR000073 -
Lja2g1238 346 PRINTS Alpha/beta hydrolase fold signature 174 187 IPR000073 -
Lja2g1238 346 Gene3D alpha/beta hydrolase 81 341 IPR029058 -
Lja2g1238 346 PRINTS Epoxide hydrolase signature 309 331 IPR000639 GO:0003824
Lja2g1238 346 PRINTS Epoxide hydrolase signature 95 113 IPR000639 GO:0003824
Lja2g1238 346 PRINTS Epoxide hydrolase signature 174 187 IPR000639 GO:0003824
Lja2g1238 346 PRINTS Epoxide hydrolase signature 115 130 IPR000639 GO:0003824
Lja2g1238 346 SUPERFAMILY alpha/beta-Hydrolases 87 333 IPR029058 -
Lja2g1238 346 PANTHER HYDROLASE 19 346 - -
Lja2g1238 346 Pfam Alpha/beta hydrolase family 91 324 IPR000073 -
Lja2g1238 346 PANTHER ALPHA/BETA FOLD HYDROLASE 19 346 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1238 90 332 Acyl Lipid Metabolism Gene Families AT3G10840 26.349 1.39e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1238 - - cam:101505498 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1238 2 11696568 11701721 Lja2g1238 2 11696568 11701721 ECH