Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1187 ATGAGCAGCAGCAGCGGAGGCTCGGCGGAGAAGGCGAGGGTGAGCCGGACATCACTGATACTGTGGCACACGCACCAGAACGACGCGGCGGCGGTGCGGAAGCTACTGGAGGAGGATCCGTCGCTGGTGAAGGCCACTGATTACGACAAACGCACGCCGCTCCACGTCGCTTCCCTCCACGGCTGGCTCGCCGTCGCCAAATGCTTGGTTGAATTTGGCGCTGACGTCAACGCCCAGGATCGTTGGAAAAACACTCCTCTGGCAGATGCAGAAGGAGCTAAAAGAACTGCAGTGATTGAGCTTTTGAAATCACATGGTGGCTCCTCTTATGGCCAAAGTGGAAGCCATTCTGATCAAAATCCTATTGCACCCCCGGTGCCTAACAAGTGTGATTGGGAAGTTGATCCTTCCGAGCTGGACTTCTCGAAGTCAGTTGGTATTGGAAAGGGATCTTTTGGTGAGATTATAATAGCCCATTGGCGTGGAACACCTGTTGCTGTCAAACGCATTCTTCCATCTCTTTCAGATGATAGATTGGTGATTCAAGACTTCAGGCATGAGGTTAATTTACTTGTGAAGCTTCGTCACCCTAATATTGTTCAGTTTCTCGGAGCTGTTACTCACAGGAAGCCCCTTATGTTAATTACGGAGTATCTAAGAGGAGGTGATCTTTATAAGCACCTCAAGGATAAAGGTTCGCTAAGTCCTTCAACAGCCATAAACTTTGGCTTGGACATTGCCAGAGGGATGGCCTATCTTCACAATGAACCGAATGTTGTAATTCATCGAGACCTAAAACCTAGGAATGTTCTTTTAGTCAATTCTAGTGCTGACCATTTGAAAGTTGGGGATTTTGGACTAAGTAAGCTTATTAAGGTCGAAAGTTCACATGATATATACAAGATGACGGGTGAAACTGGAAGCTACCGGTATATGGCTCCTGAAGTCTTCAAACACCGGAGATATGATAAGAAAGTTGATGTCTTCTCCTTTGCAATGATTCTCTATGAGATGCTTGAAGGTGAACCACCTTTTGCAAATTATGAACCTTATGAGGGAGCCAAATGTGTAGCAGAAGGACACAGGCCTAATTTTAGGGCAAAGGGTTATATCCCTGAACTACGAGAGTTAACAGAGCAATGTTGGGATGCTGACATGAATCAAAGACCTTCCTTCATAGATATCCTTAAACGGCTTGAAAAGATCAAAGAAAATTTACCTTCAGATCATCACTGGAGCTTGTTCAATTCATAA 1254 0.4585 MSSSSGGSAEKARVSRTSLILWHTHQNDAAAVRKLLEEDPSLVKATDYDKRTPLHVASLHGWLAVAKCLVEFGADVNAQDRWKNTPLADAEGAKRTAVIELLKSHGGSSYGQSGSHSDQNPIAPPVPNKCDWEVDPSELDFSKSVGIGKGSFGEIIIAHWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTHRKPLMLITEYLRGGDLYKHLKDKGSLSPSTAINFGLDIARGMAYLHNEPNVVIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVESSHDIYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPPFANYEPYEGAKCVAEGHRPNFRAKGYIPELRELTEQCWDADMNQRPSFIDILKRLEKIKENLPSDHHWSLFNS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1187 417 SUPERFAMILY Ankyrin repeat 20 108 IPR036770 -
Lja2g1187 417 ProSitePatterns Protein kinases ATP-binding region signature. 147 168 IPR017441 GO:0005524
Lja2g1187 417 CDD STKc_MAP3K-like 147 399 - -
Lja2g1187 417 PIRSF ILK 2 417 - -
Lja2g1187 417 Pfam Protein tyrosine and serine/threonine kinase 146 399 IPR001245 GO:0004672|GO:0006468
Lja2g1187 417 ProSiteProfiles Ankyrin repeat region circular profile. 49 81 - -
Lja2g1187 417 SMART ANK_2a 49 78 IPR002110 GO:0005515
Lja2g1187 417 Pfam Ankyrin repeats (3 copies) 16 80 IPR002110 GO:0005515
Lja2g1187 417 SMART serkin_6 141 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1187 417 ProSiteProfiles Protein kinase domain profile. 141 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1187 417 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 409 - -
Lja2g1187 417 Gene3D - 7 118 IPR036770 -
Lja2g1187 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Lja2g1187 417 ProSiteProfiles Ankyrin repeat profile. 49 81 IPR002110 GO:0005515
Lja2g1187 417 Gene3D Transferase(Phosphotransferase) domain 1 221 413 - -
Lja2g1187 417 Gene3D Phosphorylase Kinase; domain 1 124 220 - -
Lja2g1187 417 SUPERFAMILY Protein kinase-like (PK-like) 140 412 IPR011009 -
Lja2g1187 417 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 9 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1187 Lja-Chr2 11253764 11259757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1187 2 417 MAP Kinase Kinase Kinase AT1G14000 82.692 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lja2g1187 PK_Tyr_Ser-Thr 2.7e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1187 - - gmx:100789273 751.125