Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1158 ATGCGACGATCGAATGCCCGCAATCGGTTCGGTTCGAGTCCCAACAAAATGGATCCGAAGCTCCAAATCCGCTCCACCAACCTCTTCGCTCGCAACAACAACAACAACGCTTCATCTTCTTCTTCCTCCAGGTCCCTCTGCTCCAACCACACCTTCCTCATTCCCTTCCTCTTCTCCCTCCTCCTCCTATTCTTCTCCTACCACGCCTTCTTCTCCTCCGGTACCGGCGGTTTCCGGTACCGGATCATCGTGGATGGTGGCAGCACGGGGAGCAGGGTCCACGTCTTCAAATTCAAAGTGGGTGATAGTGTGTTCGATTTCGGGAAGGAGGGGTTGGCGTCGATGAGGGTGAACCCGGGTTTGTCGTCGTTCGCGGAGGATCCGGATGGGGCGGGCGGGTCGCTTTCGGAGCTGGTGGAATTCTCGAAGGGTTGGATCCCGAGGGAGAGTTGGAGGGATACTGAGATTCGGCTTATGGCTACTGCTGGGTTGAGGATGCTGGATGCGGAGGTGCAGGGGAGGATCCTTGAGTCTTGTAGGAGGCTCTTGCGTTCTTCTGGGTTCAGGTTTAGGGATGATTGGGCTTCTGTCATCACAGGTTCTGATGAAGGAGTGTATGCTTGGGTTGTTGCTAATTATGCACTGGGAGCTCTTGGAGGTGATCCTTTGGAGACAACTGGGATCATTGAACTTGGTGGTGCTTCTGCTCAGGTGACCTTTGTATCAAGAGAAGCAATGCTGCCCATGTTCTCACGTGCTGTTCAATTTGGGAATATCACATACAACCTTTACAGTCACAGCTTTCTTCATTTGGGCCTGAATGCTGCTCATGACTCATGGAGAGAAGCACTTATATCAGGAGATTTAAGCCTGGCTTCTCAATTTATTCAGGAGGGGTTGCATGTAGATCCTTGTACACCTTCAGGGTACTCTTATAATGTTGATTCAGGGAAGTTCTCTCCTAGCTCATACAGTAAAATAAACCAATATCATTCCACTGTTCAAACAAGAGGAAACTTTTCAGAGTGCAGATCTGCAGCATTGATGCTACTACAAAAAGGGAAAGAATCATGTTCCTATCAACATTGTGACATAGGATCAACTTTCATACCTAAGCTTCAGGGCAAATTTTTAGCGACAGAAAATTTCTTTCACACATCAAAGTTTTTCGGATTGGGGTCAAGGGCCTATCTGTCCAAGTTGATAACTGCTGGGCAGGAATTCTGTGGAGATGATTGGTTAAGGCTGAAGAAAAAATATGTATCTCATGACGAGGAAGATTTACTTCGATATTGCTTCTCTTCAGCATACATTGTTGCTCTGCTTCATGACAGTCTTGGAATTGCTCCAAATGATGAGAGGGTCAAGGTTGCTAGTCAGGTAGGAAGTATTCCGCTTGATTGGGCTTTGGGAGCTTTTATTCTGCAAACCACTAATGATGTAGATATACTGAACCACGGCTGGATTGCTTCCTTTTTCAGTGATGAATCGCCAACTTTCCTCTCACTTGTTGGAATTTTTATAATATTGTTATTTACAGCATGGTCTGTATCTAGGTGGAGGAAACCTCAGTTGAAGACAATATATGATCTAGAAAAAGGGCGATATATAATTACACGAATTGGTAGATAA 1632 0.4632 MRRSNARNRFGSSPNKMDPKLQIRSTNLFARNNNNNASSSSSSRSLCSNHTFLIPFLFSLLLLFFSYHAFFSSGTGGFRYRIIVDGGSTGSRVHVFKFKVGDSVFDFGKEGLASMRVNPGLSSFAEDPDGAGGSLSELVEFSKGWIPRESWRDTEIRLMATAGLRMLDAEVQGRILESCRRLLRSSGFRFRDDWASVITGSDEGVYAWVVANYALGALGGDPLETTGIIELGGASAQVTFVSREAMLPMFSRAVQFGNITYNLYSHSFLHLGLNAAHDSWREALISGDLSLASQFIQEGLHVDPCTPSGYSYNVDSGKFSPSSYSKINQYHSTVQTRGNFSECRSAALMLLQKGKESCSYQHCDIGSTFIPKLQGKFLATENFFHTSKFFGLGSRAYLSKLITAGQEFCGDDWLRLKKKYVSHDEEDLLRYCFSSAYIVALLHDSLGIAPNDERVKVASQVGSIPLDWALGAFILQTTNDVDILNHGWIASFFSDESPTFLSLVGIFIILLFTAWSVSRWRKPQLKTIYDLEKGRYIITRIGR* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1158 543 Gene3D Exopolyphosphatase. Domain 2 199 462 - -
Lja2g1158 543 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 37 539 IPR000407 GO:0016787
Lja2g1158 543 CDD NBD_sugar-kinase_HSP70_actin 82 241 - -
Lja2g1158 543 PANTHER APYRASE 6-RELATED 37 539 - -
Lja2g1158 543 Pfam GDA1/CD39 (nucleoside phosphatase) family 79 477 IPR000407 GO:0016787
Lja2g1158 543 Gene3D - 79 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1158 Lja-Chr2 11023029 11029230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1158 56 477 Nodulin-like Gene Family AT4G19180 28.160 1.17e-42 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1158 K01510 - gmx:100807287 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1158 2 11023029 11029230 Lja2g1158 2 11023029 11029230 ECH