Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1156 ATGCTCACCCTTGTTCAATTCTTATCAGTGTTGTTGCTACTTTTGGTCCCAGTTTCATCACAGGTTGACCAGCTTCTATTTCCTGGATTCAAAGATGTTGTTGTGGGTGCAAGAAGCAATCTAACCTTGAGTGGAGTAGCAGAGATACAGAAAAATGGAATCCTCAGATTGACAAACGACACAAGCAGATTAATGGGTCATGCTTTCTACCCTTCACCTTTTCAGCTCAAGAACACTACCACTGGTAAAGTTTTCTCGTTTTCTTCCTGTTTTGCTCTTGTTGTTGTCCCTGAGTATCCCAAGCTTGGTGGGCATGGCTTAGCTTTTGCAATTGCACCTTCCCTTGATCTCAATGCTCTACCTAGTCAGTATCTTGGTCTCTTCAATCCCACTGATGTTGGTAACTTCTCCAACCATCTCTTTGCTGTTGAGTTTGACACTGTTCAAGATTTTGTGTTCGGAGATATTAATGATAACCATGTTGGAATCGACATCAATGGTTTGCAATCCAATGCTTCTGCTACCGCAGGTTACTATGCTGATGATGCTGCTAATTTAACCAAACAAGATCTCAATATCAAAGGTGGGGTACCCATTTTAGCTTGGGTTGATTATGATTCTGCACAAAATTTAGTATCTGTAACGCTTTCTCCTTCTTCAACCAAACCCAGAAAGCCATTGTTGTCTTTTCATGTTGATCTCTCTCCCATTCTTCATGATACTATGTATGTTGGGTTCTCTGCATCCACTGGTTTGCTAGCTAGCTCCCATTATATATTGGGTTGGAGCTTTAAAATCAATGGACCAGCACCACCCCTTGATCTCTCTGCTCTCCCACAGCTTCCGCGGCCGAAGAAGAAACAACCGGCGTCTCTCATAGCAGGGGTTTCGGTCGCGGTGGTTGTTATTGCATTATGTTGCATTGCTGTTGGCATTTACCTGTACAGAAAAATCAAGAATGCTGATGTTATAGAGGCGTGGGAGCTTGAAGTTGGGCCACACAGGTACTCCTACCAAGAGCTCAAGAAAGCTACAAGAGGTTTCAAGGAGAAAGAGTTACTGGGGAGAGGTGGTTTTGGCGGTGTTTACAAAGGAACATTGCCAAATTCGAAGATTCAAGTTGCGGTTAAGCGAGTTTCACATGAATCTAAACAAGGCCTGAGGGAATTCGTGTCCGAAATAGCCAGTATAGGCCGGCTTCGCCACCGGAATTTGTGTCAGTTACTGGGCTGGTGCCGCCGTCGGGGTGACCTTCTACTTGTCTATGAATTCATGGCTAATGGGAGCTTGGACAGGTACTTGTTTAATGGGGCAGAGGTTGTGCTGAGTTGGGAACAGAGGTTTAAGATAATAAAGGATGTTGCTTCAGCTCTTTTGTATCTACATGAAGGCTATGAGCAGGTGGTGGTACACAGGGATGTGAAAGCTAGCAATGTGCTTCTAGATTTTGAACTCAATGCAAAGCTAGGTGATTTTGGATTGGCTAGATTGTATGAACATGGAGCTAACCCAAGCACAACAAGAGTGGTGGGTACCTTAGGCTATCTGGCACCAGAATTGCCTAGAACAGGAAAGGCAACTACAGGCTCTGATGTTTTCGCTTTCGGTGCACTCTTGTTGGAGGTCGCTTGTGGGCGAAGGCCTATTGAACCGAAGGCATTACAAGAAGAGTTGATTTTGGTGGATTGGGTGTGGGACTCATTCAAAGAAGGAAGAGTACTTGATGTGGTGGACCCTAAACTAAATGGCAAATTTGATGAAAGGGAGGTGCTCATGGTGTTGAAATTGGGTTTAATATGCTCTTATGATTTACCCACTGCAAGGCCTAGCATGAGGCAAGTAGCGAGGATCTTGGATGGAGAGGTTGAGTTGTCTGATGACTTGAGAAAGCCAGGAGGTATAGATCAACAGGAAGGGTTTGATGAATTTTGTCACTCACTTGCATCTTCTTCATTTGATAAGATGAGCTCAAGCTCCTACTATGGAAATAGAGACATAGACACTGCTTTTCTTTCTTATGGTAATTCACCTCGTTCCCTTCTCCATGATAGAGGAGAAACAAGGTGA 2067 0.4407 MLTLVQFLSVLLLLLVPVSSQVDQLLFPGFKDVVVGARSNLTLSGVAEIQKNGILRLTNDTSRLMGHAFYPSPFQLKNTTTGKVFSFSSCFALVVVPEYPKLGGHGLAFAIAPSLDLNALPSQYLGLFNPTDVGNFSNHLFAVEFDTVQDFVFGDINDNHVGIDINGLQSNASATAGYYADDAANLTKQDLNIKGGVPILAWVDYDSAQNLVSVTLSPSSTKPRKPLLSFHVDLSPILHDTMYVGFSASTGLLASSHYILGWSFKINGPAPPLDLSALPQLPRPKKKQPASLIAGVSVAVVVIALCCIAVGIYLYRKIKNADVIEAWELEVGPHRYSYQELKKATRGFKEKELLGRGGFGGVYKGTLPNSKIQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLCQLLGWCRRRGDLLLVYEFMANGSLDRYLFNGAEVVLSWEQRFKIIKDVASALLYLHEGYEQVVVHRDVKASNVLLDFELNAKLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGKATTGSDVFAFGALLLEVACGRRPIEPKALQEELILVDWVWDSFKEGRVLDVVDPKLNGKFDEREVLMVLKLGLICSYDLPTARPSMRQVARILDGEVELSDDLRKPGGIDQQEGFDEFCHSLASSSFDKMSSSSYYGNRDIDTAFLSYGNSPRSLLHDRGETR* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1156 688 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 287 IPR013320 -
Lja2g1156 688 SUPERFAMILY Protein kinase-like (PK-like) 330 619 IPR011009 -
Lja2g1156 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Lja2g1156 688 Pfam Protein kinase domain 348 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1156 688 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524
Lja2g1156 688 PANTHER - 7 672 - -
Lja2g1156 688 Gene3D Phosphorylase Kinase; domain 1 333 424 - -
Lja2g1156 688 Gene3D Transferase(Phosphotransferase) domain 1 425 630 - -
Lja2g1156 688 ProSiteProfiles Protein kinase domain profile. 348 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1156 688 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 7 672 - -
Lja2g1156 688 Gene3D - 25 272 - -
Lja2g1156 688 Pfam Legume lectin domain 26 278 IPR001220 GO:0030246
Lja2g1156 688 CDD STKc_IRAK 354 620 - -
Lja2g1156 688 CDD lectin_legume_LecRK_Arcelin_ConA 24 268 IPR001220 GO:0030246
Lja2g1156 688 SMART serkin_6 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1156 Lja-Chr2 11016815 11019044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1156 18 679 Receptor kinase-like Gene Family AT3G55550 56.825 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lja2g1156 Lectin_legB 5.3e-72 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1156 - - gmx:100784346 1051.97