Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1136 ATGAACGTGGATCTGGAATCCTTGGCGGAAGCCACTTCCGGAGCCATAGGATCTCTGCTTAGCACCACCATCCTCTACCCGCTTGATACATGCAAGACCAAGTACCAGGCAGAGGCACGTTCCCATGGTCTTCAGAAATACAAGAATCTCTCTGATGTGTTATGGGAGGCGATATCTACCCGTCAGGTGCTTTCCCTTTACCAGGGCCTTGGAACAAAGAATCTCCAATCCTTCTTTTCACAGTTTGTCTACTTCTATGGCTATAGCTACTTTAAAAGAATGTACCTGGAAAAAAGTGGTTATAAGTCCATTGGAACAAGTGCAAACTTGTTAATTGCTGCTGCTGCTGGGGCTTGCACAGCCTTAGTGACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAAACAAGTGCCTTTGGAAAGTCGAAAGGGCTGTTGCAAACCCTTACAGAAGGCACCTGGAGTGACGCATTTGATGGCCTTGGCATTTCCTTGTTGCTGACTTCAAACCCTGCAATTCAGTATACGGTGTTTGATCAGCTTAAACAACGAGCACTAAAGAATAAGCAAAACAAAGCCGAGAAAGGAGGATCTTCAGCATCCCTCTCTGCAGCTATGGCCTTTCTTTTGGGTGCAATTTCGAAGAGTATTGCTACCTGTGTAACATATCCCGCTATCAGGTGCAAAGTCATCATTCAAGCTGCTGACTCAGATGAAGCTTCCTCCAAAACCCAAGTAAAATCTCCAAAAACTGTGTCTGGGGTTATTGCTGGAATATGGAGAAGGGAGGGCATACTGGGCTATTTTAAAGGATTACATGCTCAGATCTTAAAAACTGTTTTGAGCTCAGCACTGCTCTTAATGATCAAGGAAAAGATCTCTGCTACTACTTGGGTGCTTATACTTGCACTTAAAAGATATCTATTAGTCCCAAAGGCGGCTAGGGTTAAAAACCTTTAA 960 0.4469 MNVDLESLAEATSGAIGSLLSTTILYPLDTCKTKYQAEARSHGLQKYKNLSDVLWEAISTRQVLSLYQGLGTKNLQSFFSQFVYFYGYSYFKRMYLEKSGYKSIGTSANLLIAAAAGACTALVTQPLDTASSRMQTSAFGKSKGLLQTLTEGTWSDAFDGLGISLLLTSNPAIQYTVFDQLKQRALKNKQNKAEKGGSSASLSAAMAFLLGAISKSIATCVTYPAIRCKVIIQAADSDEASSKTQVKSPKTVSGVIAGIWRREGILGYFKGLHAQILKTVLSSALLLMIKEKISATTWVLILALKRYLLVPKAARVKNL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1136 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 296 IPR018108 -
Lja2g1136 319 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Lja2g1136 319 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Lja2g1136 319 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Lja2g1136 319 SUPERFAMILY Mitochondrial carrier 7 292 IPR023395 -
Lja2g1136 319 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1 1 317 - -
Lja2g1136 319 Pfam Mitochondrial carrier protein 202 294 IPR018108 -
Lja2g1136 319 Pfam Mitochondrial carrier protein 103 188 IPR018108 -
Lja2g1136 319 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Lja2g1136 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Lja2g1136 319 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 317 IPR045900 GO:0005347|GO:0006635|GO:0015217
Lja2g1136 319 Gene3D Mitochondrial carrier domain 2 297 IPR023395 -
Lja2g1136 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1136 Lja-Chr2 10867149 10870907 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1136 23 315 Chloroplast and Mitochondria Gene Families AT1G25380 27.974 9.78e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1136 - - gmx:100787682 518.079