Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1128 ATGTGGAGCCGAGGATTCAATGTTTTGATCAGGGGTTGCATTTTCTTTGCCTTGTTATCTGTAGTTTCTGCTCAAGAAGCTGAACTGGGATCCACCCGCGTCGTCTTTCAGACAAATTATGGGGATATTGAATTCGGTTTCTTTCCAACTGTTGCTCCCAAAACTGTTAACCACATTTTCAAGCTTGTGAGACTTGGAGGCTATAACACTAATCATTTCTTTCGGGTGGATAAGGGATTTGTAGCCCAAGTAGCAGATGTTGCGAATGGGAGATCGGCTCCCATGAACGAGGAACAAAGAAGAGAAGCTGAAAAAACTGTTGTTGGTGAATTCAGCCAAGTCAAACATGTTCGGGGTATTCTTTCTATGGGAAGGTATGATGATCCAGACAGTGGTTCATCCTCTTTCTCAATACTACTTGGAAATGCTCCTCATCTTGATGGCACGTATGCAATATTTGGAAGAGTTACTAAAGGTGATGATACATTGGCAAAGCTTGAGCAACTACCTACCCGCAAGGAGGGTATATTTGTAATGCCAAAGGAACGCATCACTATACTGTCATCATATTACTATGACACAGAGACAGAAAATTGTGAGGTAGACAGATCAATTTTGAAGCGTAGGCTAGCTGCATCAGCTGTTGAAGTTGAAAGACAGAGAATGAAATGCTTCCCCTGA 681 0.4229 MWSRGFNVLIRGCIFFALLSVVSAQEAELGSTRVVFQTNYGDIEFGFFPTVAPKTVNHIFKLVRLGGYNTNHFFRVDKGFVAQVADVANGRSAPMNEEQRREAEKTVVGEFSQVKHVRGILSMGRYDDPDSGSSSFSILLGNAPHLDGTYAIFGRVTKGDDTLAKLEQLPTRKEGIFVMPKERITILSSYYYDTETENCEVDRSILKRRLAASAVEVERQRMKCFP* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1128 226 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 35 191 IPR002130 GO:0000413|GO:0003755
Lja2g1128 226 Gene3D - 20 201 IPR029000 -
Lja2g1128 226 CDD cyclophilin 35 188 - -
Lja2g1128 226 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 188 IPR002130 GO:0000413|GO:0003755
Lja2g1128 226 SUPERFAMILY Cyclophilin-like 32 194 IPR029000 -
Lja2g1128 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Lja2g1128 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Lja2g1128 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 IPR002130 GO:0000413|GO:0003755
Lja2g1128 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 IPR002130 GO:0000413|GO:0003755
Lja2g1128 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 15 226 - -
Lja2g1128 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 15 226 IPR044233 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1128 34 189 U-box Gene Family AT5G67530 28.049 1.47e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1128 - - gmx:100819238 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1128 2 10771501 10777594 Lja2g1128 2 10771501 10777594 ECH