Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1119 ATGGGGAAAGGACGAAGTCCTGGGAAATGGTTCAAGAACTTACTCTTGGGGAAGAAGAAATCATCATCCAAGTCTAATTCATCAAAGAATGATGATATTTTTAAACCTTCAAGTAACAAGGATGTGCTGGGGTCTTCTGAGGTGTCCGTGTCGGCTCAAACTGTGGATTCTTTGATCATATCCGCACCTCTATCTGGAACTAATGCTACTCAAGGAGTGGTTTCAGAAAAGGAAGTAGTTAGCAGGCCATCGAATGACAGGGATGTTCTTTCAAATGGAGATAAAGAGGCTCATGCTCAGCCTATTGCTAATGTGGAAACTAAAGAGGATCTCGAGAAACTCCAGCTTACAGAAGCAGCTATAAAACTTCAGGCTGCCTGTAGAGGCTATCAGGCTCGTCGAGCATTTCAAACACTCAGAGCTATCACACAACTGCAAGCTCTTATCCGTGGCCACCTGGTTAGAAGGCAAGCTGTTTCTGCATTATATTGTGTGAAAGGAATTGTTAAATTTCAAGCATTGGCTCGCGGTTACAATGTTAGGCGTTCTGATTTTGGGCTTGCAGTCCTGAAAATTCGAAAGGATACTCAATGTTCAAATTCCACTGGGCTAGTTACATCTACACAAGCAGAGAAGCTGTCAGACAGTGTCTTTATCCAGAAGCTTTTGGCTTCATCTTCCAATGTACTTCCTCTATCCCTCAATGGTGATCTTGGAGAACCTAACTTGGCTTGGAAGTGGCTTGACCGCTGGACAAGGTCACACTTTTGGAAACCTCTTCCTAAGTTAGAGAAGAAACTTGACTCAGTGTCTAAAGAAAAAAATAGAAGTGGTCAAACAGTTGAGAAGGGACAAGTTAAAAGAAATACCCGGAAATCTCCTGCTGCGAAAGCTGAAGATAGCTCAATTTCAGGTTCTAACAAATTTAAACAGCGTCCAAAGAAGGATGCAATTGCAAACCACTCGGTGCCTCCATCTCAGGAACAACCACATAAGGAAATTGATAAAACTAGTCTTAAGAAATCTCGCATGCAAAATGGTTCGGACAGGCCTGAGGCTGTTAATGAGAAAAGAAAACAGACCACCACTAGGAAAATTTCAGATCATATTGTTACTGATCTTTCAGAGCAGGGTCCAAATGCCTCTTCAGAGAAAGTGAAAGATTCGACAGCGCCAAAGTCAAAAGAGTCTGGGTCTGACAAAAGTCTTGAACAGCAAGCAAAAGAAGAGAATAATAATGAACCACTTAAGGCTCCTATTACTGTCTTGCAGACTAGTGTGCAGAATGGCGGAGATGATAAAATTCAAGGAGTTAATGAAGACTTGAATGATGGTGACAAAATTATCAGCAACAATTACCAAAGAAGGGCCTCATTACCTGCCAATTTTAATGATAAGGATAATGAGTTGCATAACACTCCAAGACTGCCCAGTTATATGGCTCCTACTGAATCTGCTAAAGCTAGGCTAAGAGGACAAGGCTCCCCAAGATTTGCTACTGATTTGGCTGACAAAAATAGTATGACCAGGCGGCATTCACTTTCATCTTCCTTTAATAGTAAGTCAGGTTCATTTTCCCCAAGAGCAGAACTAATTTCCATGGGCGGAAGAGGGGTGATAAGGACTGATAGATCTCTGTCTTCTTCAAGGGACGGAACTGACAAGATGATGCAGCCTCAGTGGAGAAGGTGA 1692 0.4226 MGKGRSPGKWFKNLLLGKKKSSSKSNSSKNDDIFKPSSNKDVLGSSEVSVSAQTVDSLIISAPLSGTNATQGVVSEKEVVSRPSNDRDVLSNGDKEAHAQPIANVETKEDLEKLQLTEAAIKLQAACRGYQARRAFQTLRAITQLQALIRGHLVRRQAVSALYCVKGIVKFQALARGYNVRRSDFGLAVLKIRKDTQCSNSTGLVTSTQAEKLSDSVFIQKLLASSSNVLPLSLNGDLGEPNLAWKWLDRWTRSHFWKPLPKLEKKLDSVSKEKNRSGQTVEKGQVKRNTRKSPAAKAEDSSISGSNKFKQRPKKDAIANHSVPPSQEQPHKEIDKTSLKKSRMQNGSDRPEAVNEKRKQTTTRKISDHIVTDLSEQGPNASSEKVKDSTAPKSKESGSDKSLEQQAKEENNNEPLKAPITVLQTSVQNGGDDKIQGVNEDLNDGDKIISNNYQRRASLPANFNDKDNELHNTPRLPSYMAPTESAKARLRGQGSPRFATDLADKNSMTRRHSLSSSFNSKSGSFSPRAELISMGGRGVIRTDRSLSSSRDGTDKMMQPQWRR* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1119 563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 162 IPR027417 -
Lja2g1119 563 Pfam Protein of unknown function (DUF4005) 466 530 IPR025064 -
Lja2g1119 563 MobiDBLite consensus disorder prediction 509 527 - -
Lja2g1119 563 MobiDBLite consensus disorder prediction 417 433 - -
Lja2g1119 563 MobiDBLite consensus disorder prediction 388 411 - -
Lja2g1119 563 ProSiteProfiles IQ motif profile. 140 167 IPR000048 GO:0005515
Lja2g1119 563 MobiDBLite consensus disorder prediction 268 443 - -
Lja2g1119 563 ProSiteProfiles IQ motif profile. 116 144 IPR000048 GO:0005515
Lja2g1119 563 MobiDBLite consensus disorder prediction 80 94 - -
Lja2g1119 563 MobiDBLite consensus disorder prediction 268 295 - -
Lja2g1119 563 MobiDBLite consensus disorder prediction 1 46 - -
Lja2g1119 563 Pfam IQ calmodulin-binding motif 117 137 IPR000048 GO:0005515
Lja2g1119 563 Pfam IQ calmodulin-binding motif 166 182 IPR000048 GO:0005515
Lja2g1119 563 Pfam IQ calmodulin-binding motif 140 157 IPR000048 GO:0005515
Lja2g1119 563 MobiDBLite consensus disorder prediction 373 387 - -
Lja2g1119 563 MobiDBLite consensus disorder prediction 18 46 - -
Lja2g1119 563 PANTHER IQ-DOMAIN 5-RELATED 1 560 - -
Lja2g1119 563 MobiDBLite consensus disorder prediction 328 371 - -
Lja2g1119 563 SMART iq_5 115 137 IPR000048 GO:0005515
Lja2g1119 563 SMART iq_5 138 159 IPR000048 GO:0005515
Lja2g1119 563 MobiDBLite consensus disorder prediction 460 563 - -
Lja2g1119 563 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 560 - -
Lja2g1119 563 MobiDBLite consensus disorder prediction 71 98 - -
Lja2g1119 563 Gene3D - 115 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1119 Lja-Chr2 10610632 10616802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1119 4 563 IQD Protein Family AT1G14380 34.323 8.99e-75 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1119 - - aprc:113869184 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1119 2 10610632 10616802 Lja2g1119 2 10610632 10616802 ECH
Lja2g1119 2 10610632 10616802 Lja1g5494 1 94117053 94123760 ECH
Lja2g1119 2 10610632 10616802 Lja4g2164 4 23297975 23305691 ECH
Lja2g1119 2 10610632 10616802 Lja4g2164 4 23297975 23305691 PCT