Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1080 ATGGCGGCTAGCAATGAATTGAAGCTTTTGAGTGGTTGGTTCAGTCCCTTTGCAATGAGGGTTAGAATTGCCCTTAACCTCAAAGGTTTGGATTACGAGGTTCTTGAGGAGACTTTGAATCCAAAAAGTGATCTGCTTCTTCAGTCCAATCCTGTGCACAAGAAAATCCCAGTTCTCATCCATAAAGATAAGCCCATATGTGAATCTGCAATCATAGTTGAGTATATTGATGAGGTTTGGAACGATGGTCCCTCTATTCTTCCTTCTGATGCTTATGAACGAGCCAATGCTCGATTTTGGGGTGCCTACATCGATGACAAGTGGTTTCTATCCATGCGAGATATGCTAGGTGCTCAAGATGATGAGGCAAAAGAGCCCCTTTTTGCGCAAATGGAAGAAGTGCTTGGGAGACTGGAAGATGTGTTCAACAAGTGCAGTGAAGGAAAGGCCTTTTTTGGAGGGGAAACTATTGGATTCATTGATATTGCTTTTGGGTGCTATTTGACCTGGTTGAGTGTGACTGAGGAGATGACTGGGAGGAAGGTGTTTGATGAAGCAAAGTTCCCTGCTTTGGTGAAATGGGCTGCAACTTTTGCTGCTGATCCTGCTGTAAAGGGAGTTCTACCAGAGACTGAAAAGCTTATTGGGTTTGCCAAGTTTCTCCAGCAAAAAATGGCTGCTGCTGCAGCTGCTCCAAAGTAG 702 0.4444 MAASNELKLLSGWFSPFAMRVRIALNLKGLDYEVLEETLNPKSDLLLQSNPVHKKIPVLIHKDKPICESAIIVEYIDEVWNDGPSILPSDAYERANARFWGAYIDDKWFLSMRDMLGAQDDEAKEPLFAQMEEVLGRLEDVFNKCSEGKAFFGGETIGFIDIAFGCYLTWLSVTEEMTGRKVFDEAKFPALVKWAATFAADPAVKGVLPETEKLIGFAKFLQQKMAAAAAAPK* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1080 233 Pfam Glutathione S-transferase, C-terminal domain 108 202 IPR004046 -
Lja2g1080 233 SFLD Main.3: Omega- and Tau-like 4 229 IPR045073 -
Lja2g1080 233 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 227 IPR010987 -
Lja2g1080 233 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 219 IPR045073 -
Lja2g1080 233 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Lja2g1080 233 Gene3D Glutaredoxin 1 86 - -
Lja2g1080 233 SFLD Main (cytGST) 4 229 - -
Lja2g1080 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Lja2g1080 233 SUPERFAMILY GST C-terminal domain-like 86 220 IPR036282 -
Lja2g1080 233 SUPERFAMILY Thioredoxin-like 6 109 IPR036249 -
Lja2g1080 233 PANTHER GLUTATHIONE S-TRANSFERASE U17 6 219 - -
Lja2g1080 233 CDD GST_C_Tau 91 221 IPR045074 GO:0004364|GO:0006749
Lja2g1080 233 CDD GST_N_Tau 7 80 - -
Lja2g1080 233 Gene3D - 87 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1080 Lja-Chr2 10290786 10293872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1080 3 219 Glutathione S-transferase Gene Family AT1G10370 60.092 6.34e-92 268
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1080 2 10290786 10293872 Lja2g1080 2 10290786 10293872 ECH
Lja2g1080 2 10290786 10293872 Lja2g1080 2 10290786 10293872 PCT