Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1070 ATGACATTGGAGGAGCCTCAACCGTCATCTTCATCTTCATCTTCATCTTCATCTTCATCTTCCAGAATGGACCAGAGCGTTCCTTCATCTCGAACGTTTCGACTCGGCCGAGTCCAGCCTCAAGCCCCTGGCCACCGCACCATCTTCTGCAACGATCGCCTCGCCAATCTTCCCGTCCGATTAACGGGGAACTCAATATCGACTACAAAGTACAACGTTTTCACTTTTCTCCCAAAAGGATTGTTTGAACAGTTCAGGAGGGTTGCTAATATCTACTTTCTTACAATCTCAGTCTTGTCTACCACACCCATCAGCCCTGTCTCTCCAATAACTAATGTGCTTCCTCTATCTCTGGTGCTTCTCCTCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAAAATGACATGGCAATAAACAATGGTACGATAGATGTACTGCGAGATCGAGAATGGGTGTCTATACCCTGGAAAAAGTTGCAAGTTGGTGACCTAGTCAAGGTTAAGCAGGATGAATTCTTTCCTGCAGATCTGCTTTTCCTGGCTAGTACAAATGTTGATGGTGTCTGCTACATTGAGACAGCTAATTTGGACGGGGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTACTTTACTCCAGAGAAGGCATCTGAGTTCAAAGGTGAAATTCAGTGTGAACAACCAAACAACTCATTATATACCTTCACTGGGAATCTTATAATTCAAAACCAAACTCTTCCTGTCAATCCAAATCAACTGTTGTTGCGAGGATGCAGTCTCAGGAATACAGAATATATTGTTGGGGTTGTTATTTTTACAGGACATGAAACAAAGGTGATGATGAATTCTATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTTGACAAGCTCATACTCACTCTTTTTGCAACTCTCTTTGTGATGTGTTTTATAGGAGCCATAGGCAGTGCTATTTTTGTAAACAAGAAGTACTTTTATTTACATCTTGAATCATCAGAGGAGGGCTCAGCACAGTTTGACCCCAGAAACAGATTTTTGGTTTTCCTTCTGACTATGTTTACCCTCCTCACTTTATACTCAACAATCATCCCTATTTCACTTTATGTATCGATAGAGATGATCAAATTTATTCAGTCCACTCAATATATTAACAAGGACTTGCACATGTACCATTATGAAACCAATACCCCAGCATTGGCCAGAACATCAAATCTGAATGAAGAGCTTGGGCAGGTGGAATACATTTTCTCTGACAAGACTGGAACTTTAACAAGAAACTTAATGGATTTCTTCAAGTGTTCAATTGGGGGAGAGATCTATGGTAATGGCGTGACCGAAATTGAGAAGGGAATAGCAGAGCGTAGTGGCATTAAAATTAAGGAAAATGTCTCACCAAATGCAGTGCGAGAGAGGGGTTTTAATTTTGATGATGCTAGGCTTATGAGAGGAGCTTGGAGGAATGAGCCGAATCCTGATAGCTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTGCTTCCCCAGGGGGATGAGTCCCCTGAGAAGATCTGCTATCAAGCTGCATCACCTGATGAGTCTGCTTTGGTAATTGCTGCGAAGAACTTCGGTTTTTTCTTTTACAGACGCACGCCTACGATGATATATGTTCGTGAATCTCATGTTGAGAAAATTGGTAAAATTCAAGAAGTCTCGTATGAGATTTTGAATGTGCTTGAGTTTAACAGTACAAGGAAGCGTCAATCTGTTTTATGCCGTTATCCAAATGGGAGGCTTGTATTGTACTGTAAGGGTGCTGATTCTGTAATCTATGAAAGATTAGCAGATGGTTATAATGATATTAAAAAAGTGACTAGGGAGTATTTGGAACAATTTGGATCTTCTGGACTACGCACATTATGCCTGGCTTACAAAGAATTACATCCTGATGTTTATGAAAGCTGGAATGAGAAGTTCATCCAGGCCAAATCTTCTCTACGTGATCGGGAAAAGAAGTTAGATGAGGTGGCAGAACTTATAGAAACTGATCTCATTTTAATTGGTAGCACTGCCATAGAGGACAAGCTTCAAGATGGAGTACCAGCCTGCATAGATATTCTTCAAAGAGCTGGCATTAAAATTTGGGTGCTCACAGGGGACAAGATTGAAACAGCAATTAATATTGCCTGTGCATGCAATTTAATAAACAATAAGATGAAACAGTTTATTATCAGTTCAGAAACTGATGCAATTAGAGAAGTTGAAGACAGGGGGGACCAAGTAGAAATTGCACGGTTTATTAAAGAAGTGAAGAAAGAACTGAAGAAGTGCTTTGAAGAAGCAAAAAGCCATTTTAGCTCTCTATCTGGACCAAAATTAGCACTTGTAATTGATGGAAAATGTCTAATGTATGCATTGGATCCTAGTTTGCGAGTCATGCTGCTGAATTTGAGTTTGAATTGTCATACAGTTGTTTGCTGCCGCGTTTCTCCTTTACAGAAAGCACAGGTCACGCGTTTGGTCAAGAAAGGTGCACAAAAAATAACACTTAGTATTGGTGATGGAGCCAATGATGTTAGCATGATCCAAGCTGCTCATGTTGGCGTTGGGATAAGTGGATTGGAGGGGATGCAAGCTGTGATGGCAAGTGATTTTGCCATTGCACAGTTTCGTTACCTTGCAGATTTGCTGCTTGTTCATGGCCGGTGGTCATATCTTCGAATATGCAAGGTGGTGACTTACTTCTTTTACAAGAATCTCACATTCACTCTTACTCAGTTTTGGTTTACCTTTCAAACTGGGTTTTCTGGCCAGAGATTTTATGATGATTGGTTTCAGTCATTATATAATGTTATCTTCACAGCACTTCCTGTGGTCATTGTTGGACTATTTGACAAGGATGTCAATGCATCTCTATCCAAGAAGTATCCTGAACTATACAGGGAGGGAATAAGAAATGTATTTTTCAAATGGAAAATTGTGGCTATATGGGCCTTCTTTTCTGTCTACCAGTCTTTAATATTCTTCTATTTTGTGAGTTCGTCCAGTTTAAGTGCTAAAAATTCAGCAGGCAAGACATTTGGACTCTGGGATGTCAGCACAATGGCCTTCACATGTGTTGTAGTAACAGTCAACTTGCGAGTTCTTATGATTAGTAATTCAATCACAAGATGGCACTACATTAGTGTTGGTGGAAGTATATTAGCGTGGTTTATTTTTGTTTTAATAGATTCAGTGATCAGCACTCCTTATGATCGACAGGAGAATGTGTATTTTGTCATATATGTCTTGATGAACACATTATATTTCTACCTCACACTAATTCTTGTCCCTGCCGCGGCACTTTTTGGTGACTTTGTGTACCAAGGGGTTCAGAGATGGTTCTTCCCTTATGATTATCAGATAATTCAAGAGATGCACAAACATGAGAATGATGACACCGGCAGGGCACAACTGCTAGAGACAGGGGACCGGCTTTCTCCATCTGAGGGAAGGAGCTATGCCCTATCTCAACTATCACGTGAGACAACAAAGCACACTGGGTTCACTTTTGACTCACCTGGTTATGAGTCATTTTTTGCCGCACAGTTTGGTGTACATGCCCCACAAAGGGCCTGGGATGTTGCAAGACGAGCAAGTATGAGATCTCGGCCAAAGATTGTACAGAAAAAGTAA 3687 0.4071 MTLEEPQPSSSSSSSSSSSSSRMDQSVPSSRTFRLGRVQPQAPGHRTIFCNDRLANLPVRLTGNSISTTKYNVFTFLPKGLFEQFRRVANIYFLTISVLSTTPISPVSPITNVLPLSLVLLLSLIKEAFEDWKRFQNDMAINNGTIDVLRDREWVSIPWKKLQVGDLVKVKQDEFFPADLLFLASTNVDGVCYIETANLDGETNLKIRKALEKTWDYFTPEKASEFKGEIQCEQPNNSLYTFTGNLIIQNQTLPVNPNQLLLRGCSLRNTEYIVGVVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILTLFATLFVMCFIGAIGSAIFVNKKYFYLHLESSEEGSAQFDPRNRFLVFLLTMFTLLTLYSTIIPISLYVSIEMIKFIQSTQYINKDLHMYHYETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMDFFKCSIGGEIYGNGVTEIEKGIAERSGIKIKENVSPNAVRERGFNFDDARLMRGAWRNEPNPDSCKEFFRCLAICHTVLPQGDESPEKICYQAASPDESALVIAAKNFGFFFYRRTPTMIYVRESHVEKIGKIQEVSYEILNVLEFNSTRKRQSVLCRYPNGRLVLYCKGADSVIYERLADGYNDIKKVTREYLEQFGSSGLRTLCLAYKELHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIETDLILIGSTAIEDKLQDGVPACIDILQRAGIKIWVLTGDKIETAINIACACNLINNKMKQFIISSETDAIREVEDRGDQVEIARFIKEVKKELKKCFEEAKSHFSSLSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHTVVCCRVSPLQKAQVTRLVKKGAQKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVVIVGLFDKDVNASLSKKYPELYREGIRNVFFKWKIVAIWAFFSVYQSLIFFYFVSSSSLSAKNSAGKTFGLWDVSTMAFTCVVVTVNLRVLMISNSITRWHYISVGGSILAWFIFVLIDSVISTPYDRQENVYFVIYVLMNTLYFYLTLILVPAAALFGDFVYQGVQRWFFPYDYQIIQEMHKHENDDTGRAQLLETGDRLSPSEGRSYALSQLSRETTKHTGFTFDSPGYESFFAAQFGVHAPQRAWDVARRASMRSRPKIVQKK* 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1070 1228 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 829 935 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja2g1070 1228 Pfam E1-E2 ATPase 145 381 - -
Lja2g1070 1228 Pfam Cation transport ATPase (P-type) 529 617 - -
Lja2g1070 1228 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 62 1142 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lja2g1070 1228 Pfam Phospholipid-translocating P-type ATPase C-terminal 884 1134 IPR032630 -
Lja2g1070 1228 Gene3D - 687 896 IPR023214 -
Lja2g1070 1228 SUPERFAMILY HAD-like 414 898 IPR036412 -
Lja2g1070 1228 SFLD C1.7: P-type atpase like 408 907 - -
Lja2g1070 1228 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 26 1224 - -
Lja2g1070 1228 CDD P-type_ATPase_APLT_Dnf-like 63 1016 - -
Lja2g1070 1228 SUPERFAMILY Calcium ATPase, transmembrane domain M 64 1134 IPR023298 -
Lja2g1070 1228 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 26 1224 - -
Lja2g1070 1228 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Lja2g1070 1228 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Lja2g1070 1228 MobiDBLite consensus disorder prediction 1 36 - -
Lja2g1070 1228 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 433 695 IPR023299 GO:0000166
Lja2g1070 1228 Pfam Phospholipid-translocating ATPase N-terminal 48 112 IPR032631 -
Lja2g1070 1228 SFLD p-type atpase 408 907 IPR044492 -
Lja2g1070 1228 SUPERFAMILY Calcium ATPase, transduction domain A 144 287 IPR008250 -
Lja2g1070 1228 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Lja2g1070 1228 Gene3D - 123 291 - -
Lja2g1070 1228 Gene3D - 557 678 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1070 Lja-Chr2 10198001 10214193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1070 13 1227 Primary Pumps ATPases AT1G59820 77.239 0.0 2016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1070 K14802 - gmx:100815547 2134.38