Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1069 ATGCCGCCGGAAACTGACGTCACGCCATCGTCGCCACCGCCGGCTTCTTTCAGGCTCCGTTGGGACGTGTTCCTGAGCTTCAGGGGAACCGACACGCGCCACACCTTCACGAAGGACCTCTACAACGCGCTCCACGCCCGCGGGGTTCGGGTCTTCCGTGACGACGACGGGTTGGGCCGCGGCGATGAGATAAAAGCGAGCCTTCTGGAGGCCATTGACGACTCTGCGGCTTCTGTCATCGTTCTCTCGGAGGACTACGCCTCCTCTCGGTGGTGCCTGGAGGAGTTGGCCAAGATTTGCGACTGTGGGAGGTTAATCCTGCCCGTTTTCTACCGGGTTGACCCGTCGGATGTCCGAAAGCAAAAGGGTCCATTTGAAGGGTCTTTCAAGTCCCATGCAGAGAGGTTTGAGGCAGAGAAGGTTCAGCTCTGGAGGGATGCCATGGCCAAAGTGGGTGGAATCGCTGGTTGGGTTTGTCAAGAAAACAGTGACAGTGATAAGCTCATTCGAGTTTTGGTGGAAACAGTTATGAAGCAGATGAGGAACACTCCACTGAGTGTGGCTCAGTATACAGTGGGGGTTGATGATAAAGTGGAAGAGTTAAAAAAGTTGCTTGATGTGAAAATCAATGATGTGAGGGTTCTGGGGTTGTATGGGATGGGTGGTGTTGGTAAAACAACTCTGGCCAAGAGCCTCTTCAACACCCTTGTAGTTCATTTTGAGCGCCGCAGCTTCATTTCAAATGTCAGAGAAGTTTCAAGACATGGTGATGGTGGTGGTTTGGTTTCTCTTCAAAACAGAATTCTTGGTGATCTTTCCTCTGGTGGAACAGTCAATGATGTTAATGATGGTGTTTCGGCTATCAAAAGAGTATTACAAGGAAACAAAGTTCTGCTAATCTTGGATGATGTTGATGAGATACAGCAGCTTGATTTTTTGATGGGTAATAGGGAATGGTTTCATAAAGGAAGCCGAGTTGTGATAACAACAAGGAATACACAAGTTTTACCTGAAAGTTATGTTGATATGTTCTATGAGGTGAGGGAATTGGAATTATCTGCAGCTCTAGCATTATTCTGTCACCATGCAATGAGAAGAAAAAAGCCTGCAGAAGGTTTTTCGAATCTATCAAAACAAATTGTAAAAAAAACTGGAGGGTTGCCTTTGGCTTTGGAAGTTATTGGCTCTTTTCTGTTTGATAAGAGGACGAGTAAGGAGTGGAAAGATGCTTTGGAGAGGCTGAAGCAGATTCCTCATCCAGGTGTTCAGGATGTGTTGAAGATCAGTTATGATGCGTTGGATGAACAGGAGCAGTGCATATTCCTTGACATTGCTTGTTTATTTGTGCAAATGGAAATGGAAAGAGATGATGTGGTTGATATATTGAATGGGTGCAATTTTAATGGAGAGATAGCAATAACAGTCCTTACTGCTAAATGTCTGATCAAAATCACTACCCGTAATGTTGTGTGGATGCATGATCAAGTTAGGGACATGGGGAGGCAAATTGTTCAGAATGAAAGCCTTACAGATTATGGTCTGCATAGCAGGCTCTGGGACCGTGATCAAATATTGACTGTTTTGAAGAGTAACAAGGGAACTAGAAGTACTCAAGGGATTGTCCTAGATTGTGTGAAGAAAAACAGCTCAAATCCTAGAAATCGCTCTGCTGATGAAATTACTTGGGATCACTTTCAGCAAAAGCCCAGTTGTAAATCTGCATCAGCATTTATCAAAGAGAAGTGTAAAAAGTATATGCAGGACAGAGAAGAGAAAGCAAAAGAGGTTGTCCTTCAGACAAAGCACTTTCAACCAATGGTTTCCTTGAGATTGCTTCAAATAAATTATTCCAGATTGGAAGGACAATTCAAATGTCTGCCTCCTGGACTAAAGTGGTTGCAGTGGAAACAATGTCCATTAAGGAATTTGCCTTCAAGCTATAATCCTTTGGAGCTTGCTGTGATTGATCTCTCAGAAAGTAAGATTGGAAGGTTATGGGGCAGGCGCAGTAACAAGGTGGCTAAGCACTTGATGGTTTTAAAACTCTCCAGATGCCACAGATTGACAGCAACTCCGGATTTAAGTGGCTATCTATCTCTGAAAAAAATAGTTTTGGAAGAATGCTCTCATTTAACTAGGATCCATGAATCACTTGGAAACCTAAGTACCTTGATTCACTTGAACTTGCACCAGTGCTATAACCTTGTTGAAGTACCTGCTGATGTCTCTGGTCTGAAACATCTTGAGGACCTTATTCTTTCTGGCTGCTGGAAGCTGAAAGCATTGCCGACAGACATAAGCTGCATGATTTCTTTAAAACAACTTGTTCTTGATGAAACTGCTATAACTGAGCTACCTGGTTCCATCTTCCACCTGACAAAGCTTGAAAAGCTGAGTGCAGATAAATGCCAGTTTTTGAAGAGGTTACCTACCTGCATTGGGAATCTCTGCTCACTGCAGGAATTGTCTCTTAACAACACAGCATTGGAGGAATTACCTGATTCTGTTGGTTGCTTGGAGAATCTTGAGCTGCTTGGTTTGGTGGGGTGCAGGTCCCTCTCTTTGATTCCTAACTCTGTTGGGAAACTAATTTCATTGAAAAGATTACATTTTGATGTCACTGGAATTAAAGAATTGCCTGATTCTATTGGTTCTTTATCATATTTAAGGAAACTCTCTGTTGCAGGCTGTAGTTCTCTTGACAGGTTGCCTCTGTCAATAGAAGCTTTAGTTTCTATTGCTGAGCTTCAGTTAGATGGCACATCAATCACCAATTTGCCAGATCAAGTTAGGGCCATGAAAATGCTTAAAAAGCTTGAGATGAGAAACTGTCAGCATCTCAGGTTTCTACCAGCATCAATTGGCTTCCTGTCAGCTCTTACGACTTTGGACATGTATAACACTAACATAACTGAATTACCAGACTCAATTGGAATGTTAGAAAATCTTACCAGGTTGAGATTAGACATGTGCAAACAGCTCCAAATGCTTCCAGCTTCCATGGGAAATTTGAAATCCTTGCAAAGGTTACTCATGAAGGAAACAGCAGTTACCCATCTACCTGATAGCTTTCGAATGCTTTCAAGCCTGGTTGAACTACAAATGGAAAGAAGGCCTTATCTTAATGCGGTTGGAAACAACGTGCCTCCAATAGACATAATTTCTAACAAGCAAGAAGAACCTAATTCAGAGTCGATCTTAACCTCTTTCTGCAATCTAACCATGCTGGAACAGCTAAACTTTCATGGATGGAGTATATTTGGAAAAATTCCAGACAATTTTGAAAATCTGTCATCACTGGAAACCTTAAGTTTAGGGCACAACAATATTTGCAGTCTTCCAGCAAGCATGAGAGGCCTCTCCTATCTCAAAAAGCTTTATTTGCAAGATTGCAGGGAGCTGATGCTTCTGCCTCCTCTTCCTTCTAGCTTAGAGGAGCTTAACATTGCAAACTGTACAGCAGTAGAGTACATATCTGATATTTCAAACTTGGACAGGTTAGAGGAGTTCAACCTTATGAATTGCGAAAAGGTGGTGGATATACCAGGCCTTGAACACTTGAAGTCCTTAAGAAGGTTGTACATGAATGGTTGCATTGGATGCTCCCTTGCTGTGAAGAGAAGATTTTCCAAGGTTCTACTAAAAAAGTTAGAGATTTTGATTATGCCTGGAAGCAGAATTCCAGATTGGTTCTCAGGGGAATCAGTTGTGTTTTCGAAGCGAAGAAACCGTGAGCTTAAAGGTATAATTTGTGCCGGCGTGCTTTCTTTCAACAATATACCAGAAGACCAAAGAGATAAACTGCAGTTAATGGATGTTCAAGGAAAAGTCTTCAATTTGACTGACAATGTTTACAGCACAACGTTTCGCCTTCTAGGAGTACCTAGGACAAATGAACACCACATATTTTTGCGCAGATTTGGAGTTCACACTTCCTTGGTTTTTGAGTTAAAAGATAGGTGTACCTTGCATTTGACAAAGCGAAACCCGCCCTATGTTGAGGGGCTGGAGCTGAAGAATTGTGGAATATATTTAGTGTTTGAAGGTGATGATGATTTTGAGGGAGATGAGGGATCACTAGAAGAAGGTCAATACTCTGTTTCACAAAAATTAGCTAAGTTCTTCAACACTAGTGCAGAAGGTGACCCTGATCTTCGTGTGTGA 4164 0.4251 MPPETDVTPSSPPPASFRLRWDVFLSFRGTDTRHTFTKDLYNALHARGVRVFRDDDGLGRGDEIKASLLEAIDDSAASVIVLSEDYASSRWCLEELAKICDCGRLILPVFYRVDPSDVRKQKGPFEGSFKSHAERFEAEKVQLWRDAMAKVGGIAGWVCQENSDSDKLIRVLVETVMKQMRNTPLSVAQYTVGVDDKVEELKKLLDVKINDVRVLGLYGMGGVGKTTLAKSLFNTLVVHFERRSFISNVREVSRHGDGGGLVSLQNRILGDLSSGGTVNDVNDGVSAIKRVLQGNKVLLILDDVDEIQQLDFLMGNREWFHKGSRVVITTRNTQVLPESYVDMFYEVRELELSAALALFCHHAMRRKKPAEGFSNLSKQIVKKTGGLPLALEVIGSFLFDKRTSKEWKDALERLKQIPHPGVQDVLKISYDALDEQEQCIFLDIACLFVQMEMERDDVVDILNGCNFNGEIAITVLTAKCLIKITTRNVVWMHDQVRDMGRQIVQNESLTDYGLHSRLWDRDQILTVLKSNKGTRSTQGIVLDCVKKNSSNPRNRSADEITWDHFQQKPSCKSASAFIKEKCKKYMQDREEKAKEVVLQTKHFQPMVSLRLLQINYSRLEGQFKCLPPGLKWLQWKQCPLRNLPSSYNPLELAVIDLSESKIGRLWGRRSNKVAKHLMVLKLSRCHRLTATPDLSGYLSLKKIVLEECSHLTRIHESLGNLSTLIHLNLHQCYNLVEVPADVSGLKHLEDLILSGCWKLKALPTDISCMISLKQLVLDETAITELPGSIFHLTKLEKLSADKCQFLKRLPTCIGNLCSLQELSLNNTALEELPDSVGCLENLELLGLVGCRSLSLIPNSVGKLISLKRLHFDVTGIKELPDSIGSLSYLRKLSVAGCSSLDRLPLSIEALVSIAELQLDGTSITNLPDQVRAMKMLKKLEMRNCQHLRFLPASIGFLSALTTLDMYNTNITELPDSIGMLENLTRLRLDMCKQLQMLPASMGNLKSLQRLLMKETAVTHLPDSFRMLSSLVELQMERRPYLNAVGNNVPPIDIISNKQEEPNSESILTSFCNLTMLEQLNFHGWSIFGKIPDNFENLSSLETLSLGHNNICSLPASMRGLSYLKKLYLQDCRELMLLPPLPSSLEELNIANCTAVEYISDISNLDRLEEFNLMNCEKVVDIPGLEHLKSLRRLYMNGCIGCSLAVKRRFSKVLLKKLEILIMPGSRIPDWFSGESVVFSKRRNRELKGIICAGVLSFNNIPEDQRDKLQLMDVQGKVFNLTDNVYSTTFRLLGVPRTNEHHIFLRRFGVHTSLVFELKDRCTLHLTKRNPPYVEGLELKNCGIYLVFEGDDDFEGDEGSLEEGQYSVSQKLAKFFNTSAEGDPDLRV* 1388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1069 1387 Pfam NB-ARC domain 195 433 IPR002182 GO:0043531
Lja2g1069 1387 Gene3D Ribonuclease Inhibitor 594 787 IPR032675 -
Lja2g1069 1387 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 157 IPR035897 -
Lja2g1069 1387 SUPERFAMILY L domain-like 900 1226 - -
Lja2g1069 1387 Gene3D - 350 434 IPR042197 -
Lja2g1069 1387 SMART LRR_typ_2 1004 1026 IPR003591 -
Lja2g1069 1387 SMART LRR_typ_2 769 792 IPR003591 -
Lja2g1069 1387 SMART LRR_typ_2 863 886 IPR003591 -
Lja2g1069 1387 SMART LRR_typ_2 1097 1120 IPR003591 -
Lja2g1069 1387 SMART LRR_typ_2 910 933 IPR003591 -
Lja2g1069 1387 SMART LRR_typ_2 816 839 IPR003591 -
Lja2g1069 1387 SMART LRR_typ_2 957 980 IPR003591 -
Lja2g1069 1387 ProSiteProfiles Leucine-rich repeat profile. 1099 1120 IPR001611 GO:0005515
Lja2g1069 1387 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 1336 IPR044974 GO:0006952
Lja2g1069 1387 PANTHER TMV RESISTANCE PROTEIN N-LIKE 18 1336 - -
Lja2g1069 1387 Gene3D - 179 342 IPR027417 -
Lja2g1069 1387 Gene3D - 19 178 IPR035897 -
Lja2g1069 1387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 444 IPR027417 -
Lja2g1069 1387 SUPERFAMILY L domain-like 491 944 - -
Lja2g1069 1387 SMART till_3 20 154 IPR000157 GO:0007165
Lja2g1069 1387 PRINTS Disease resistance protein signature 214 229 - -
Lja2g1069 1387 PRINTS Disease resistance protein signature 931 947 - -
Lja2g1069 1387 PRINTS Disease resistance protein signature 291 305 - -
Lja2g1069 1387 PRINTS Disease resistance protein signature 384 398 - -
Lja2g1069 1387 ProSiteProfiles TIR domain profile. 19 180 IPR000157 GO:0007165
Lja2g1069 1387 Pfam TIR domain 21 184 IPR000157 GO:0007165
Lja2g1069 1387 Gene3D Ribonuclease Inhibitor 788 877 IPR032675 -
Lja2g1069 1387 Gene3D Ribonuclease Inhibitor 1054 1209 IPR032675 -
Lja2g1069 1387 Gene3D Ribonuclease Inhibitor 878 1053 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1069 Lja-Chr2 10190565 10197090 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1069 21 892 WRKY Transcription Factor Family AT4G12020 28.427 1.34e-81 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1069 - - gmx:100784137 2064.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1069 2 10190565 10197090 Lja2g1069 2 10190565 10197090 ECH
Lja2g1069 2 10190565 10197090 Lja2g1071 2 10215833 10222858 PCT