Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1055 ATGGCTTTGAATGTGATGCTTTTTCTGAGCAGCCTTATTGTTTTACACAGTTTTCTAACACCAACTTGCCATTGCCAGACCTGTTCTCCTCAGAACATTGAAACTTTCTATCCCATTGAAGCTCCGAAACCAGCCCCCATAACACAACCTCTTGAACCAATATCAAAGCCACAAGCACCATCACCATCACCAGGGCTGGGATCGGCGGCAGCGGTGTCCACAAGTTCTTCATCAAACATTAGGATAGTAATTGCAGTAGCTCTAGCTGTTTCTGGTTTGATTTTCCTTTTAGCACTGATTTGCTTCATCAGAGCAAGGAGGAGGGGAAAGGTGATAATGGGCAGCACTGCTTCTGCCACCGCAGATAGGCGTGTTGATGTGCCGCCTCAGGTGAACGTGTTTGAGAGAATGGAAGGAAACATCAAGGGACTGATTGTTGATGAGGGTGGTTTGGATGTGATTTATTGGAGAAAGCTTCAAGGTAGAAACACAGACAGGAATTTCCAAAAGGAGGTCTTGCCTAATCCCAAAAGCAGTGAAGAAGATGATCATGAAGGAAATCAAGGGAGAAGGTATAAGTCTATTAAAGAAACTCCTCTTCTTAGAGGGAAATCTTCAACTTCCCACATGAATATATTTCCAGAAGAGCCATATACAATTATGAGTATTCCACCTCCAGCTCCTCCTCCCATTGTTTTTGCATCAGTTGGAGCTGCTTCTTTCACATCAATTCCTAAGATGAAAACTCCTGCTCCTGCACCACCACCTTCCCTTCCAACAATACCTGATAGAAAGATTCAAGAACCAGAACCAGCAGTAGCACCTCCTCCACCAATTCCAGTTACAAAGAATCTAGCACCACCATCACCTCTTCCTCCACCAATCTCTACTAGAAATAGTCCAGCACCACCACCTCCTCCTCCTCCACCAATTCCAGATAGAAAGAATCCAGCACCACCACCTCCTCCTCCACCAATCCCTGCACCACCACCTCTTCCTCCTCCAATCTCTGCCAGAAAGAGTCCAGTGCCACCGCCTCCTCCACCAAAGTCAGGTGGTTTCAATTTCAAGTCATCCTCAAAACCACCACCTATCCCTATGGAAACACCAGTTACCAACAGTAAGCAAGGAAACTCTTCAGGTGAAGTAAGACTGAAGGCATTACATTGGGATAAGGTGAATACTAATCTTGACCACTCTATGGTGTGGAACAAACTTGACCGTGGCTCTTTCAGGGTTGATGAGGATCTTATGGAAGAACTCTTTGGGTACATTGCCACCAAATCAAATAGTAATGATACCCTAAAAGGAAATGACTCAAAGAGTCCAAGAAGGGATGCCTCAGCTCGATCAACAAATGCTTTCCTTCTTGACCCCAGAAAATCACAGAACACTGCTATAGTTTTGAAATCTATGGCAGTATCACAAAAAGAAATTATCGATGCACTGGTTGATGGTCAAGGCCTTAACACAGACACCATTGAAAAGCTTGCTAGAATAGCCCCAACAGAAGAAGAACAGTCCCTTATACTTGAATATGAAGGAGACCCAGCAAGACTTGCAGCAGCTGAATCTTTCTTGTATCACATCCTCAAAGCTGTTCCTTCAGCATTTAAGCGGTTAAACGCCTTGCTATTCAGGTTGAACTATGACTCTGAGATTCTAGAAATCAAGGAGTTACTACAGACCATTGAGCTAGGGTGTAAGGAGCTTCGAACACAAGGAGTGTTTTTAAAGCTACTTGAAGCAGTGCTTAAGGCCGGAAATCGTATGAATGCAGGTACTCACAGAGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTAAGGAAGCTCTCTGATGTCAAGAGCACTGATGGGAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTAGTCCGTACTGAAGGGAAACGTGCTGTTCTTAACCGCAACTGCAGTTTGAGTCGTAGTAACAGTAGGAGCAGCAACAGCAGTGGAGAGTCTCAGAACTCTGTTGCTTCAAATGAACAAAGACAAAGGGAATATATAACACTAGGATTACCAATTGTAGGAGGGGTCAGTTCTGAGTTTTCCAATGCAAAGAAAGCGGCACTTACAGATTACAACACTTTTGTTGGTTCAATTTCAGCACTCTCAGCAAGGATAGTAGACTTCCGGCAACTTGTTCCCAAGTTTGGAGATGATAAAGGAGGAAAGTTTTTTAGAGAAATGAACAATTTTCTTGAAAATGCTGAGGAGGAATTGAAATTAGTAAAAGAAGAGCAAACAAGAGTAATGCAGCTTGTCAGGAGCACAACACATTATTACCAAGGAGCTTCAAAAGATAGTGCAGACTACGCTCTCTCTTTATTTGTCATAGTCAAGGATTTTCTGGGAATGGTTGATCAAGCCTGCATAGAGATTGCTCGTAACATGCAGAAGAGGAAGGTACCCAAGGCAAATTCAGGGTAA 2451 0.4353 MALNVMLFLSSLIVLHSFLTPTCHCQTCSPQNIETFYPIEAPKPAPITQPLEPISKPQAPSPSPGLGSAAAVSTSSSSNIRIVIAVALAVSGLIFLLALICFIRARRRGKVIMGSTASATADRRVDVPPQVNVFERMEGNIKGLIVDEGGLDVIYWRKLQGRNTDRNFQKEVLPNPKSSEEDDHEGNQGRRYKSIKETPLLRGKSSTSHMNIFPEEPYTIMSIPPPAPPPIVFASVGAASFTSIPKMKTPAPAPPPSLPTIPDRKIQEPEPAVAPPPPIPVTKNLAPPSPLPPPISTRNSPAPPPPPPPPIPDRKNPAPPPPPPPIPAPPPLPPPISARKSPVPPPPPPKSGGFNFKSSSKPPPIPMETPVTNSKQGNSSGEVRLKALHWDKVNTNLDHSMVWNKLDRGSFRVDEDLMEELFGYIATKSNSNDTLKGNDSKSPRRDASARSTNAFLLDPRKSQNTAIVLKSMAVSQKEIIDALVDGQGLNTDTIEKLARIAPTEEEQSLILEYEGDPARLAAAESFLYHILKAVPSAFKRLNALLFRLNYDSEILEIKELLQTIELGCKELRTQGVFLKLLEAVLKAGNRMNAGTHRGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRTEGKRAVLNRNCSLSRSNSRSSNSSGESQNSVASNEQRQREYITLGLPIVGGVSSEFSNAKKAALTDYNTFVGSISALSARIVDFRQLVPKFGDDKGGKFFREMNNFLENAEEELKLVKEEQTRVMQLVRSTTHYYQGASKDSADYALSLFVIVKDFLGMVDQACIEIARNMQKRKVPKANSG* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1055 816 PANTHER FORMIN-RELATED 7 322 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lja2g1055 816 MobiDBLite consensus disorder prediction 429 454 - -
Lja2g1055 816 PANTHER FORMIN-LIKE PROTEIN 4 7 322 - -
Lja2g1055 816 PANTHER FORMIN-LIKE PROTEIN 4 296 813 - -
Lja2g1055 816 MobiDBLite consensus disorder prediction 175 198 - -
Lja2g1055 816 SUPERFAMILY Formin homology 2 domain (FH2 domain) 455 810 - -
Lja2g1055 816 MobiDBLite consensus disorder prediction 247 379 - -
Lja2g1055 816 Pfam Formin Homology 2 Domain 382 794 IPR015425 -
Lja2g1055 816 Coils Coil 734 761 - -
Lja2g1055 816 Gene3D Formin, FH2 domain 397 815 IPR042201 -
Lja2g1055 816 PANTHER FORMIN-RELATED 296 813 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lja2g1055 816 SMART it6_source 375 809 IPR015425 -
Lja2g1055 816 MobiDBLite consensus disorder prediction 48 70 - -
Lja2g1055 816 MobiDBLite consensus disorder prediction 248 262 - -
Lja2g1055 816 MobiDBLite consensus disorder prediction 645 670 - -
Lja2g1055 816 MobiDBLite consensus disorder prediction 167 209 - -
Lja2g1055 816 ProSiteProfiles Formin homology-2 (FH2) domain profile. 375 816 IPR015425 -
Lja2g1055 816 MobiDBLite consensus disorder prediction 269 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1055 Lja-Chr2 10015505 10018596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1055 4 810 FH2 protein (formin) Gene Family AT1G70140 42.112 6.67e-179 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1055 - - gmx:100780368 691.804