Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1036 ATGCCGGGGCCTCGCTCGAAGTCGGAGAAGAAGCATGACGCTGATAACCAGCTCCGGCGGGACCCATACGAGGTCCTCGGCGTCTCCCGGAGCTCCACCGATCAGGAAATCAAGACCGCTTACCGCAAAATGGCACTCAAATACCATCCTGACAAGAATGCTAATGATCCTAAAGCAGCTGATATGTTTAAAGAGGTTACCTTTTCATATAATATCTTGTCAGATCCAGATAAACGGCGTCAGTATGACTCAGCTGGCTTTGAGGCTGTTGAATCAGAAAACCAAGAGTTGGAGTTGGATCTTTCAAGTTTGGGTGCTGTCAATACAATGTTTGCAGCACTTTTTAGCAAACTGGGTGTGCCAATTAAGACAACAGTATCTGCAACTGTTCTTGAAGAGGCACTCAATGGTTCAGTGACCATTCGTCCACTTCCATTGGGACAATTTATATCTAAAAGGGTTGAGAAACAATGTGCACACTTCTATTCAGTTACAATAACAGAAGAGGAAGCCCGAGCTGGATTTGTTTGTCGAGTGCAATCATCAGAGAAAAGCAAGTTCAAGTTATTATATTTTGATCGGGAAGACAAAGGTGGCTTAAGTCTTGCACTCCAGGAAGACTGTGCTAAAACAGGGAAGGTTACCTCTGCTGGAATGTATTTTCTTGGGTTTACTGTTTATCGGTTGGATCAGACAATGAACTCTATAGCTGCTGCCAAGGATCCAGATACATCATTTTTCAGAAAGCTGGATGGGTTCCAGCCATGTGAATTGACAGAATTGAAGGCCGGTACCCATGTGTTTGCCGTTTATGGTGACAACTTTTTCAAAAGTGCAAATTATACAATAGAAGCCCTGTGTGCTGCACCGTTTCGTGAAGAAAAAGAAAATTTAAGAACCATTGAAGCTCAAATTTTGTCTAAAAGGGCAGAAATATCGAAGTTTGAGGCCGAATATCGCGAGGTTCTGGCACAATTCACGGAGATGACAAGTAGATATGCACATGAAATGCAAGCAATTGATGAGCTATTGAAACAAAGAAATGAAATACATGCATCATACACTGTTGCTCCTTTAAAACGAAGTACGAGTAAGAGCAGACCCAAACGTTCTTCGAAGGAGGCAAATGAAGATGGCCAAGCAAGGGAGAAGAGGAGTTCAAGAGATCGATCAAAGAAGAAGAAGTGGTATAACCTCCACTTAAGAGTTGATAAGAGAAAGGCTTGCTAA 1230 0.4276 MPGPRSKSEKKHDADNQLRRDPYEVLGVSRSSTDQEIKTAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSAGFEAVESENQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGSVTIRPLPLGQFISKRVEKQCAHFYSVTITEEEARAGFVCRVQSSEKSKFKLLYFDREDKGGLSLALQEDCAKTGKVTSAGMYFLGFTVYRLDQTMNSIAAAKDPDTSFFRKLDGFQPCELTELKAGTHVFAVYGDNFFKSANYTIEALCAAPFREEKENLRTIEAQILSKRAEISKFEAEYREVLAQFTEMTSRYAHEMQAIDELLKQRNEIHASYTVAPLKRSTSKSRPKRSSKEANEDGQAREKRSSRDRSKKKKWYNLHLRVDKRKAC* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1036 409 SUPERFAMILY Chaperone J-domain 20 90 IPR036869 -
Lja2g1036 409 ProSitePatterns Nt-dnaJ domain signature. 63 82 IPR018253 -
Lja2g1036 409 MobiDBLite consensus disorder prediction 1 20 - -
Lja2g1036 409 Pfam DnaJ domain 21 83 IPR001623 -
Lja2g1036 409 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 1 408 - -
Lja2g1036 409 MobiDBLite consensus disorder prediction 368 386 - -
Lja2g1036 409 MobiDBLite consensus disorder prediction 355 396 - -
Lja2g1036 409 CDD DnaJ 21 75 IPR001623 -
Lja2g1036 409 Gene3D DnaJ domain 5 105 IPR036869 -
Lja2g1036 409 PRINTS DnaJ domain signature 41 56 IPR001623 -
Lja2g1036 409 PRINTS DnaJ domain signature 58 78 IPR001623 -
Lja2g1036 409 PRINTS DnaJ domain signature 23 41 IPR001623 -
Lja2g1036 409 PRINTS DnaJ domain signature 78 97 IPR001623 -
Lja2g1036 409 SMART dnaj_3 20 78 IPR001623 -
Lja2g1036 409 Coils Coil 298 318 - -
Lja2g1036 409 PANTHER DNAJ DOMAIN-CONTAINING PROTEIN-RELATED 1 408 - -
Lja2g1036 409 MobiDBLite consensus disorder prediction 1 31 - -
Lja2g1036 409 ProSiteProfiles dnaJ domain profile. 21 86 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1036 Lja-Chr2 9758563 9763437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1036 19 84 C2H2 Transcription Factor Family AT1G74250 42.254 5.53e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1036 - - gmx:100800929 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1036 2 9758563 9763437 Lja2g1036 2 9758563 9763437 ECH