Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1025 ATGTCGGTCTCCTGCTCCAACTTCTTCCCCGACTCCGACCTTCTCTGCGGCGAGGACACCTCCAGCATCCTATCCGGAGATTCGCCGGAATTCTCCTCCGACCTCGATTCCTCGCCGCCGCCGTTGGACGATGATGATGAGACCATCGCCGGATTCATCGAAGATGAGCGCAACTTCGTCCCTGGATTTGACTACCTCTCCAGGTTCCAGTCTCGCTCCCTTGACGCCGCCGCCAGAGAAGAATCCGTCGCATGGATTCTCAAGGTACAGGCTTATTTTGGTTTTCAACCTGTGACGGCTTATCTTGCCGTCAACTACTTGGATCGGTTTCTGAATTCTCGGCAGTTGCCGCAAACAAATGGGTGGCCGATGCATCTTCTATCAGTTGCGTGTTTGTCTTTAGCTGCAAAGATGGAGGAATCTCTAGTTCCATCTCTGGTGGACATTCAGGTAGAAGGTGCCAAATACATATTTGAACCCAGAACAATTCAAAGGATGGAGCTACTTGTTCTGGGCATCTTGGATTGGAGGCTAAGATCAATCACCCCATTTTGCTTCCTCAGTTACTTTGCGTGCAAGTTAGATTCAACTGGAACTTTTTCTGGGTTTCTCATTTCACGGGCCACACAGATTATCTTATCTAATATCCGAGAGATAAGCTTTCTTGCATATTGGCCATCATGCATTGCTGCCGCGGCCACACTCTATGCAGCTAACGAAATCCCTGATTGCTCTCTCGTTAAGCCCGAGCATGCCGAATTGTGGTGTGAGGGGCTTACGAAAGAGAAAATTATGGGATGCTACCGGTCAATGCAAGAATTTGGGATTGAAAACAACCAGAGTACTAAACCTCCAAGAGTGTTACCGCAGCTGCGAGTAACAACTCAACCTCTCATGAGGTCAAGTGTCTCATCATCTTCCTCTTCTCCTTCATCCCCATTGTCTTATAAAAGGAGGAAATTAAATAACTGTTTATGGGTAGATGATGACAAAGGAAACTTCCAATGA 1008 0.4772 MSVSCSNFFPDSDLLCGEDTSSILSGDSPEFSSDLDSSPPPLDDDDETIAGFIEDERNFVPGFDYLSRFQSRSLDAAAREESVAWILKVQAYFGFQPVTAYLAVNYLDRFLNSRQLPQTNGWPMHLLSVACLSLAAKMEESLVPSLVDIQVEGAKYIFEPRTIQRMELLVLGILDWRLRSITPFCFLSYFACKLDSTGTFSGFLISRATQIILSNIREISFLAYWPSCIAAAATLYAANEIPDCSLVKPEHAELWCEGLTKEKIMGCYRSMQEFGIENNQSTKPPRVLPQLRVTTQPLMRSSVSSSSSSPSSPLSYKRRKLNNCLWVDDDKGNFQ* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1025 335 MobiDBLite consensus disorder prediction 20 46 - -
Lja2g1025 335 Gene3D - 53 242 - -
Lja2g1025 335 PANTHER CYCLINS 1 323 IPR039361 -
Lja2g1025 335 SUPERFAMILY Cyclin-like 42 178 IPR036915 -
Lja2g1025 335 MobiDBLite consensus disorder prediction 20 35 - -
Lja2g1025 335 Pfam Cyclin, N-terminal domain 51 178 IPR006671 -
Lja2g1025 335 SUPERFAMILY Cyclin-like 163 276 IPR036915 -
Lja2g1025 335 SMART Cyclin_C_2 181 309 IPR004367 -
Lja2g1025 335 Pfam Cyclin, C-terminal domain 181 283 IPR004367 -
Lja2g1025 335 CDD CYCLIN 85 171 IPR013763 -
Lja2g1025 335 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Lja2g1025 335 Gene3D - 62 179 - -
Lja2g1025 335 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 323 - -
Lja2g1025 335 SMART cyclin_7 84 172 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1025 Lja-Chr2 9642774 9646589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1025 1 330 Core Cell Cycle Gene Families AT1G70210 62.275 9.68e-133 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1025 K18810 - gmx:100775224 500.745