Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1008 ATGGTGAGTGAAGGAGTGAGTGTAACAGTAGCCATGGTTACAACTCAGTTCTTGGATGTGGGCTTGAACACTCTAGTGAAGTCAGCCACCAACAGTGGAATGAGCAACTATGTTTTTGTTGTCTACTCAAACCTTTTGGCTCTATGTTTCCTTCTACCATCCACCATCCTCTACCATAGGAAGAGAGCTCCTCCCCCAATTCCAAGCTCAATTCTCTGCAGAATGTTTCTTATCTCTTGCCTCAGTACTGCAGTGCAGACTTTGGTGTACACTGGAATTGGATATAGCTCCCCCACACTGGCCTCAGCTGCGGTGGACCTTGTGCCTGCTTTTACCTTCATACTTGCTGTAATTTCCAGGATGGAAAATCTGAACCTGAAACTGCATAGGAGCCAGGCAAAAATTGTTGGCACAGTAGTTTCCATTGCAGGGGCACTAATCATGACTTTATATAAAGGGGTGCCGCTTATTAGGCAAAATTTAGCATTGGGAGGACGTGGAGCTTATCTCTCAGTGCAATCAGACTGGATACTTGGTGGCTTTATTCTTGCAACTGCTAGCTTTTGTGCTTCTGTTATGTTTATTGTCATGACTTGGGTTATCAGGGACTATCCTGAAGAACTAGTGTTAACAACCATTTGTTCTAGCTTGGTGGTGGTCCTATCTGCTATAGTTGCTCTAATTGCTGAGGGTACTTCAAAAGCTTGGATTCTCAGATCTGATAAGGAGTTGATAGCTGTGTGTTATTCAGCAATTTTTGTGGTATCAATGCGGGGTGTTGTGAACGCATGGGCGTTTCGTAAGAAAGGACCAATTTACGTAGCCATGTTCAGCCCTTTAGGAATGGTAATTGCGGCTGCCATGGGAGTAGTACTTCTAGGAGACAGTCTTTATCTGGGAAGCTTGATTGGAGCTGCTACAATAGCTATTGGATTTTATGCTGTGATTTGGGCGCAAGCTCAAGAGGAAAATGTGCTACATATTGAGAGGAATGATTTTGCCTCATCATCTTCTTCCTCCCCTCTCATGTCGACCATAGCCATAGATGCATAG 1053 0.4425 MVSEGVSVTVAMVTTQFLDVGLNTLVKSATNSGMSNYVFVVYSNLLALCFLLPSTILYHRKRAPPPIPSSILCRMFLISCLSTAVQTLVYTGIGYSSPTLASAAVDLVPAFTFILAVISRMENLNLKLHRSQAKIVGTVVSIAGALIMTLYKGVPLIRQNLALGGRGAYLSVQSDWILGGFILATASFCASVMFIVMTWVIRDYPEELVLTTICSSLVVVLSAIVALIAEGTSKAWILRSDKELIAVCYSAIFVVSMRGVVNAWAFRKKGPIYVAMFSPLGMVIAAAMGVVLLGDSLYLGSLIGAATIAIGFYAVIWAQAQEENVLHIERNDFASSSSSSPLMSTIAIDA* 351
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1008 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 320 - -
Lja2g1008 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
Lja2g1008 350 Pfam EamA-like transporter family 21 149 IPR000620 GO:0016020|GO:0016021
Lja2g1008 350 PANTHER WAT1-RELATED PROTEIN 15 322 IPR030184 GO:0016021|GO:0022857
Lja2g1008 350 PANTHER WAT1-RELATED PROTEIN 15 322 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja2g1008 Lja-Chr2 9467504 9469925 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1008 11 349 Nodulin-like Gene Family AT3G28050 42.938 5.35e-81 249