Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1007 ATGGTGAGTGAAGGAGTGAGTGTAACAGTTGCAATGGTTGCAACTCAGTTCTTGGATGTGAGCTTGAACACTCTAGTCAAGTCAGCTACCAACAGTGGAATGAGCAACTATGTTTTCATTTTCTACTCAAACCTTTTGGCTCTTTGTTTCCTTCTACCATCCACCATCCTCTACCACAGGAAGAGAGCTCCTCCCCCAATTCCAAGCTTAATTCTTTGCAGATTGTTTCTTATCTCTTGCCTCAGTACTGCAGTGCAGACTTTGTTGTTCACTGGAATTCGATATAGCTCCCCCACACTGGCCTCAGCTGTGATGGACCTTGTCCCTGCTTTTACCTTCATACTTGCTGTAATTTCCAGGATGGAAAATCTGAATGTGAAACTGCATAGCAGCCAGGCAAAAATTGTTGGCACAGAGGCTTCCATTGCAGGGGCACTAATCTTGACTTTATATAAAGGGATGCCGCTTATAAGCGGTTCTATGCAAAATTTAGCATTGGGAGGAAGTGGAACTTACCTCTCAGTGGAATCAGAATGGATTCTTGGTGGTTTTATTCTTGCAACTGCTAGCTTTTGCGCTTCAGTTATGTACATTGTCGCGACTAGAGTTATCAGGGAGTATCCTGAAGAGCTAGTGATAACAACTGTTTGTTGTAGCTTGGGGGTGATCCTATCCTCCATAGTGGCTCTAATTGCAGAGGGAACTTCAAAAGCAATTTTTGTGGTGTCGATGCGGAGTGTTGTGTACGCGTGGGCGTTACGTAAGAAGGGACCAATTTATGTAGCTTTGTTCAGCCCTTTAGGAATGGTAATTGCAGTTGTCTTGGGAGTATTATTTCTAGGAGACAGTTTTTATCTGGGAAGCCTGATTGGAGCTGGCACAATAGCTATTGGATTTTATGCTGTGATATGGGCGCATGCTCAAGAGGAAAATATGGTAAATATTGAGAAGGATGATTTTGCCTCATCTTCTTCAGCCCCTCTCATGTCGACCAAAGCCATAGATGCATAG 1011 0.4362 MVSEGVSVTVAMVATQFLDVSLNTLVKSATNSGMSNYVFIFYSNLLALCFLLPSTILYHRKRAPPPIPSLILCRLFLISCLSTAVQTLLFTGIRYSSPTLASAVMDLVPAFTFILAVISRMENLNVKLHSSQAKIVGTEASIAGALILTLYKGMPLISGSMQNLALGGSGTYLSVESEWILGGFILATASFCASVMYIVATRVIREYPEELVITTVCCSLGVILSSIVALIAEGTSKAIFVVSMRSVVYAWALRKKGPIYVALFSPLGMVIAVVLGVLFLGDSFYLGSLIGAGTIAIGFYAVIWAHAQEENMVNIEKDDFASSSSAPLMSTKAIDA* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1007 336 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 307 - -
Lja2g1007 336 Pfam EamA-like transporter family 21 127 IPR000620 GO:0016020|GO:0016021
Lja2g1007 336 Pfam EamA-like transporter family 183 303 IPR000620 GO:0016020|GO:0016021
Lja2g1007 336 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 150 - -
Lja2g1007 336 PANTHER WAT1-RELATED PROTEIN 16 309 - -
Lja2g1007 336 PANTHER WAT1-RELATED PROTEIN 16 309 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1007 Lja-Chr2 9464821 9466717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1007 11 335 Nodulin-like Gene Family AT3G28050 41.854 3.35e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1007 - - gmx:100793168 460.299