Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1004 ATGGTGAAACCATGCGATTCCTCTTCTTCTTCTCATCGTCACTCTCCTCCTCTCTTCCATTCTACCACCACCACCACCATGGCTTCCACTCTCTCACTCTCCTTCCCCTTAGACCCTCAAAACCTCCACACCCGCTTCATCTCCGCCGCCACCACCACCGCCAATCTCTACAAAACCCGTCCATTCACTCTCTCAACAACCCCCCACACAAACCCACTTCCCAGTTTCCACCCACACCCTTCCCCCTCCTTCAGAATCTCATCTTCCCAATCCCAATCCCCCTCTTCCGCCACACTCGACGACCCATCTCACCCGTTTCTCCCGGGTCGGTTTCTCACCAACGAGGAGCTTCAGCAGCTCGAATCCCTCGAAGCCTTCCTCTACTCCCACGAGCTGGAATCCGGAACCATGTGGGTCCGGGTCATGCGGGCGCACGAGGTGGACGCCGTCGTTGGGTTACTGGCGGAGTCGTTCGCCGAGTCGATGCTGTTGCCGGCGGCTTATGTCAACGTGTTGGCGTTTCTGGTGAAGCAGTATTTGGTGGAGCGGAGGGCGTTGATGCCGTACATGGCTACGCTTGTTGGATTCTACAAGGGGGTGGGGGATGGTGATGGAGAAGGAGGGGAAATGCAGATGGCTGGGACTGTGGAGGTTTGTTTTGATAGAAGGGGTGCGAACTCTTCTGTTCCCTCGCCGGCGCCGCCCAAGGATTCGCCTTACATTTGTAACATGGCTGTGCAAAAGTCTCTCAGGAGGAGGGGCATTGGCTGGCATCTTCTAAAGGCAAGTGAGGAGCTAATTTCTCAGATGAGCTCTTCAAGAGAGGTTTACTTGCATTGCCGAATGATTGATGCTGCTCCATTTAACATGTATACAAAAGCAGGATACAAGGTTATGAACACAGATAGTATTTTAGTCCTGCTAATGTTGCAAAGACGCAAACACTTGATGTGCAAGAACCTTCCTCTCTTAAGTACACCTCCAGAAACCGATCTGTCAGATTCTGACATGTAA 1014 0.5276 MVKPCDSSSSSHRHSPPLFHSTTTTTMASTLSLSFPLDPQNLHTRFISAATTTANLYKTRPFTLSTTPHTNPLPSFHPHPSPSFRISSSQSQSPSSATLDDPSHPFLPGRFLTNEELQQLESLEAFLYSHELESGTMWVRVMRAHEVDAVVGLLAESFAESMLLPAAYVNVLAFLVKQYLVERRALMPYMATLVGFYKGVGDGDGEGGEMQMAGTVEVCFDRRGANSSVPSPAPPKDSPYICNMAVQKSLRRRGIGWHLLKASEELISQMSSSREVYLHCRMIDAAPFNMYTKAGYKVMNTDSILVLLMLQRRKHLMCKNLPLLSTPPETDLSDSDM* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1004 337 MobiDBLite consensus disorder prediction 67 101 - -
Lja2g1004 337 Gene3D - 129 320 - -
Lja2g1004 337 CDD NAT_SF 234 279 - -
Lja2g1004 337 Pfam Acetyltransferase (GNAT) family 223 296 IPR000182 GO:0016407
Lja2g1004 337 MobiDBLite consensus disorder prediction 81 100 - -
Lja2g1004 337 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 27 336 - -
Lja2g1004 337 MobiDBLite consensus disorder prediction 1 22 - -
Lja2g1004 337 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 136 301 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja2g1004 Acetyltransf_1 4.9e-06 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1004 - - lja:Lj2g3v1378720.1 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1004 2 9452583 9454387 Lja2g1004 2 9452583 9454387 ECH