Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0998 ATGGAAGAACATCTCACTCCATTGGCTGTTACCCATCTCCTTCAACACACTCTCAGAAGTTTGTGCATCCATGAAAATTCTCAGTGGGTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAGTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTGGATATTGGTCTGGGAAGATGGGTTCTGCAATTTTGCTGCCTCAGCAGCACCTGAAGTTAACTCTGGTGATTGTCCTACCTCATCTGTTTATGGGAACTGTGAGTTCCAGCCCTACCAAGGTCTGCAACCTGAGCTCTTCTTCAAGATGTCTCATGAGATCTATAACTATGGTGAAGGTTTGATAGGAAAAGTGGCTGCAGATCACAGTCACAAGTGGATATATAAAGAACCTAATGATCAAGAAATCAACTTCTTGTCAGCATGGCACAATTCAGCAGACTCACACCCTAGGACATGGGAAGCACAGTTCTTGTCTGGTATAAAGACCATAGCCCTCATTGCTGTTAGAGAGGGTGTTGTTCAATTAGGAGCCGTACACAAGGTGATTGAAGACTTGAGCTATGTGGTTCTATTGAGGAAAAAGTTCAGCTACATTGAGAGCATCCCAGGGGTGCTGTTACCACACCCTTCATCTTCTGCATACCCTTACAAGGTAGAAGGGTATGGACCACCAGAACAGTGGCATTTCCAAGGAAATCTTGCTCCACCAGCTGAGTTATACAATGAGCATTACAACCTTCCACTGAAGATAACACCCTCCATGAGCAGCCTTGAGGCACTGCTCTCTAAACTCCCCTCGGTCATCCCGCCTCATCTACCACCACCAACACAACCACCACAGTCACATGTTCTGCCATCACAACAAAGGCCATTGGAATTCATGGGAATGCAGAAAGTGGCGAAGGAAGAGTTAGATGAGGAGGAGGTGTATAGGCCTGAACTTGAAATAGGTGAGAGCAGCAGTTCCATGCCTGCAGGGTACCACCACCACCACCATCAACATCAACAACAACACCATTTCCATCAGCAACAAGATCAGAATGTTAGTGGCAACAACAATAATGGGTTTTGA 1101 0.4605 MEEHLTPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAPEVNSGDCPTSSVYGNCEFQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSHPRTWEAQFLSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVEGYGPPEQWHFQGNLAPPAELYNEHYNLPLKITPSMSSLEALLSKLPSVIPPHLPPPTQPPQSHVLPSQQRPLEFMGMQKVAKEELDEEEVYRPELEIGESSSSMPAGYHHHHHQHQQQHHFHQQQDQNVSGNNNNGF* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0998 366 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN 1 345 - -
Lja2g0998 366 MobiDBLite consensus disorder prediction 328 366 - -
Lja2g0998 366 MobiDBLite consensus disorder prediction 350 366 - -
Lja2g0998 366 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 205 IPR025610 -
Lja2g0998 366 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0998 Lja-Chr2 9409673 9411934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0998 15 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.292 3.46e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0998 - - vun:114173114 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0998 2 9409673 9411934 Lja2g0998 2 9409673 9411934 ECH