Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0992 ATGGCATCACGATCATATGCTAATCTATTAGACTTAGGTGGAGGTTTTTTGGATTCTCCTCGGACCGCAAGAGCTATTCCAAGGACTATGACGGTTCCTGGAGTTATTTCTGACCTGGATGCTAATGGCAGATGTGATGGGGATTCAGATGTTAGCTCTTCTGGTTACAGGGAGCGGAAAATCATTGTGGCAAACATGTTGCCATTGCAGGCTAAAAGAGATATAGAAACTGGCAAATGGTGTTTCAATTTGGACAAGGATTCAATTTTGTTGCAGTTAAAAGATGGTTTCTCTTCTGACACTGAGGTGCTCTATGTTGGATCCCTCAAGGTTGACATAGATGCTGGTGAGCAGGAAGAAGTTGCTCAGAAATTACTGGAGGACTTCAATTGCATACCTACCTTTCTACCACATGATCTCCAGAAAAAGTTTTATCTTGGCTTTTGCAAGCAGCAGCTGTGGCCTCTGTTTCATTACATGCTACCTATGTGTGCTGATCACGGAGACCGGTTTGACCGCTTGCTTTGGCAGGCTTACGTTTCTGCAAACAAAATATTTGCAGACAAGGTTATGGAGATAATAAATCCTGATGATGATTATGTTTGGGTTCATGACTATCACTTGATGGTTTTGCCTACATTCCTAAGGAAGCGGTACAATCGAGTTAAACTTGGTTTCTTTCTTCACAGTCCTTTCCCTTCATCTGAAATTTACCGAACTTTGCCTGTCAGGGATGAAATTCTGAGGGGATTGTTGAATTCTGATTTAATTGGTTTTCATACATTTGATTATGCTCGCCACTTCCTCTCTTGCTGCAGTAGAATGTTGGGTCTGGACTATCAATCTAAGAGAGGACATATAGGACTAGATTACTATGGGCGTACTATATTCATCAAAATTTTGCCTGTGGGCATACACATGGGTAGGCTTGAGTCTGTATTAAATCTTCATTCTACGGCCGCTAAAATGAAAGAGATTCAGGAAGAGTTCAAGGACAGGAAGGTGATTCTTGGTGTTGATGACATGGATATTTTTAAAGGCCTCAATCTGAAGCTTCTAGCTGTTGAGCAGCTGCTCCAGCGAAATCTACATTTGCAAGGCAAGGTTGTCCTAGTTCAGATTGTGAATCCTGCTAGGGGTTCAGGGAAGGATGTTCTCGAAGCAAAGAAAGAAACATATCTAATTGCCCGGAGGATTAATGATACTTATGGTTCAAACCATTATCGACCAGTTATTCTCATTGACCATCCTGTTCCTCGTTTTGAGAAGAGTGCCTATTATGCTGTGGCTGAATGCTGCATTGTCAATGCGGTGAGGGACGGCATGAACTTAGTCCCATACAAATACATTGTCTGCAGACAAGGAACTGCACAGCTTGATAAAGCTTTGAATAGAAAGAGTGATTCTCCTCGTACGAGCATGCTTGTTGTGTCTGAGTTTATTGGCTGTTCTCCTTCTCTAAGTGGAGCAATCAGGGTCAATCCCTGGGACATAGATGCTGTGGCTGACGCTCTGTATTCAGCCATTACTATGAGTGATTCAGAGAAGCAATTGAGGCATGAGAAACACTACCGATATGTCAGTTCTCATGACATGGCATATTGGGCCCGCAGCTTTGTGCAGGATTTGGAGAGAGCATGCAAAGATCATTACACCAAAAGGTGCTGGGGAATGGGTTTGGGCCTAGGGTTTAGAGTTGTTTCTCTTTCTCATGGTTTTAGGAAATTGTCTGTTGACCACATTGTTTCAGCATACAAAAGAACCAGTAGAAGAGCCATATTTCTTGATTATGATGGTACTGTTGTACCACAATCTTCTTTAAATAAAATCCCCAGCCCTGAAGTCATATCCGTGCTTAATGATCTGTGTAATGATACTAAAAATACTGTGTTCATTGTGAGTGGGAGGGGAAGAGATTCTTTAAGTGATTGGTTTTCTTCATGCAAAATGATTGGGCTTGCAGCTGAACATGGATACTTTTTAAGGTGGAGTAAAAATTCCGAATGGGAGGCTAGTCACTTGTCTGCTGATCTTGAATGGAAGAGGATTGTGGAACCTGTCATGCAGTTGTATACGGAAGCAACTGATGGATCTAATATTGAAATTAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCCGATTTTGGCTGTTGCCAAGCCAAAGAATTGTTGAATCATCTGGAAAGTGTGCTTGCTAATGAACCTGCAGTTGTTACGAGGGGCCAGCATATTGTTGAAGTCAAGCCACAGGGAATAAGCAAGGGTTTGGTAGCTGAAAACATTCTCTCCACTATGGTTGATAATGGTAATCCACCAGATTTTGTGATGTGCATTGGAGATGATATTTCTGATGAAGACATGTTTGAGAGCATATTGAGGACAGTCTCATCCCCGTCATTGCCAGTAGCTCCCGAAATCTTTGCTTGCACTGTTGGTCAGAAACCTAGCAAGGCCAAGTATTATCTTGATGATCCTTCTGATGTCATGAAGTTGCTTCAAAGCCTTAGTACTTCATCTAATCCAAGACCCAGGCATCTAGCCCAATTCCAAGTTTCTTTTGAGAGCACAGTTTGA 2583 0.4216 MASRSYANLLDLGGGFLDSPRTARAIPRTMTVPGVISDLDANGRCDGDSDVSSSGYRERKIIVANMLPLQAKRDIETGKWCFNLDKDSILLQLKDGFSSDTEVLYVGSLKVDIDAGEQEEVAQKLLEDFNCIPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPMCADHGDRFDRLLWQAYVSANKIFADKVMEIINPDDDYVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYQSKRGHIGLDYYGRTIFIKILPVGIHMGRLESVLNLHSTAAKMKEIQEEFKDRKVILGVDDMDIFKGLNLKLLAVEQLLQRNLHLQGKVVLVQIVNPARGSGKDVLEAKKETYLIARRINDTYGSNHYRPVILIDHPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTAQLDKALNRKSDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALYSAITMSDSEKQLRHEKHYRYVSSHDMAYWARSFVQDLERACKDHYTKRCWGMGLGLGFRVVSLSHGFRKLSVDHIVSAYKRTSRRAIFLDYDGTVVPQSSLNKIPSPEVISVLNDLCNDTKNTVFIVSGRGRDSLSDWFSSCKMIGLAAEHGYFLRWSKNSEWEASHLSADLEWKRIVEPVMQLYTEATDGSNIEIKESALVWHHQDADPDFGCCQAKELLNHLESVLANEPAVVTRGQHIVEVKPQGISKGLVAENILSTMVDNGNPPDFVMCIGDDISDEDMFESILRTVSSPSLPVAPEIFACTVGQKPSKAKYYLDDPSDVMKLLQSLSTSSNPRPRHLAQFQVSFESTV* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0992 860 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 1 851 - -
Lja2g0992 860 TIGRFAM T6PP: trehalose-phosphatase 589 838 IPR003337 GO:0003824|GO:0005992
Lja2g0992 860 Pfam Glycosyltransferase family 20 59 544 IPR001830 GO:0003824|GO:0005992
Lja2g0992 860 SUPERFAMILY HAD-like 591 838 IPR036412 -
Lja2g0992 860 Gene3D Glycogen Phosphorylase B; 53 311 - -
Lja2g0992 860 Gene3D - 590 707 IPR023214 -
Lja2g0992 860 Gene3D - 720 850 IPR023214 -
Lja2g0992 860 CDD HAD_TPP 592 833 - -
Lja2g0992 860 Pfam Trehalose-phosphatase 594 829 IPR003337 GO:0003824|GO:0005992
Lja2g0992 860 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 851 IPR001830 GO:0003824|GO:0005992
Lja2g0992 860 Gene3D Glycogen Phosphorylase B; 312 528 - -
Lja2g0992 860 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 592 794 IPR006379 -
Lja2g0992 860 CDD GT20_TPS 59 544 IPR001830 GO:0003824|GO:0005992
Lja2g0992 860 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0992 Lja-Chr2 9345172 9350937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0992 1 860 Trehalose Biosynthesis Gene Families AT1G23870 73.502 0.0 1344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0992 K16055 - gmx:100818536 1583.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0992 2 9345172 9350937 Lja2g0992 2 9345172 9350937 ECH