Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja2g0952 | ATGTGCCGACGTGGGTTTCCGTCCACCTTTCACACACTAAGATATAGCCTACCAGAACTAGTGATTCAGATGGGATTGTCCCAAAAAATGAAGAGAGTAGTCTCGCTCATATCTTCTCAGTGCTTTGTGTTCCTTCTACTCAAGTTTTTACTACTATCAGCAACTGTAATGGCAGAACCAAGGGCCAAGACAGTCCAGATAACATGTGCCAAACAATTGGAGCACAACACCACTATCTTTGTTCCTAATTTTGTTTCCACAATGGAGAAGATCAGTGAACAGATGCGCACTGATGGCTTTGGCACGGCAGTCGCGGGGACAGGACCTGATACTAACTATGGCCTTGCCCAGTGCTATGGAGATCTTTCATTACTTGATTGTGTGTTGTGTTATGCTGAGGCACGCACGGTTCTTCCTCAGTGTTTCCCTTACAACGGTGGTCGCATTTACCTTGATGGTTGCTTCATGAGGGCTGAGAACTATAGTTTCTTTAATGAGTATACAGGACCAGGAGACAGAGCTGTGTGTGGGAACACAACTAGGAAGAACTCAACTTTTCAAGCAGCGGCGAAGCAGGCGGTTTTAAGTGCAGTCCAAGACGCACCCAACAATAAAGGCTATGCAAAGGGGGTCGTTGCTGTTTCAGGAACAGCAAATGAATCTGCTTATGTTCTGGCTGATTGTTGGAGGACTTTGGACTCAAGCTCTTGCAAAGCATGTCTTGAGAATGCATCTTCGTCCATATTGGGGTGCTTGCCCTGGTCAGAAGGGCGAGCACTCAACACTGGGTGCTTCATGAGGTACTCGGACACAGATTTTCTTAACAAAGAAGCAGAAAACGGAAGTTCAGGAGGTAATGTAATGGTGATAGTTGTTGCAGTAGTCAGTTCGGTGGTTGTTACGGTGGTAGGAGTCATTATTGGGGCTTATGTCTGGAAACGAAGATACATTCAAAAGAAACGAAGAGGTTCTTATGATCCAGATAAGTTAGCAAAGACTCTTCAGCATAACAGCTTGAACTTCAAGTACTCTACATTGGACAGGGCTACTGGATCTTTTCATGAGAGCAACAAGTTAGGGCAAGGAGGATTTGGAACAGTATATAAAGTATTTCTCTCAAAACCTTTATCTCACCATTTAGCATATCAAAGCCACTCTTACAATTTGCTATTGCAGGGAGTTCTAGCAGATGGAAGAGAGATTGCTATCAAGAGGTTATATTACAATAACAGACATAGAGCAGCAGATTTCTACAATGAAGTCAACATAATTAGTAGCGTGGAACACAAGAATCTAGTCAGACTATTAGGATGCAGTTGCTCAGGACCTGAAAGCCTGCTTGTATATGAATTTCTGCCGAACAAAAGTCTCGATGGTTTCATTTTTGACAAAAACAAGGGCAGAGAACTGAACTGGGAAAAGAGATATGAAATTATCACCGGAACAGCTGAAGGATTAGTTTACCTGCATGAGAACTCCAAAGTCAGGATAATTCACAGAGACATAAAAGTCAGCAACATCCTACTGGATGCAAAGCTTCGTGCTAAAATTGCAGATTTTGGTTTGGCTAGGTCCTTTCAAGAAGACAAGAGCCACATAAGTACAGCTATTGCTGGAACTTTGGGGTACATGGCTCCAGAGTACCTAGCTCATGGTCAGTTAACAGAAAAGGTAGACGTATATAGTTTTGGTGTGTTACTGCTAGAGATAGTTACTGGTAGACAGAACAACAGGAGCAAGGAATCAGAGTATACAGACAGCTTAATTTTAGTGGCATGGGAGCATTTTCAGACAGGGACTGCAGAACAATTATTTGATCCAAATATAGAGTTGCATGAGGCCCACAATGGCAATGTTAAGAATGAGATTTTAAGGGTGATTCACATAGGACTTCTATGCATCCAAGAGATCCCTTCATTACGGCCAACTATGTCAAAGGTGTTACAGATGCTAACAAAGAAGGAGGAGCTTCTTGTTGCTCCCTCTAATCCACCCTTCTTAGATGAGAGTACCATGGCACTCCATGACACAAGTGGTGACCCATTGTACCCTCTTAATGCAGATGATTCAATAGCTACTATGGCCCATAGCTCTTTTTATGCCAGGTGA | 2109 | 0.4301 | MCRRGFPSTFHTLRYSLPELVIQMGLSQKMKRVVSLISSQCFVFLLLKFLLLSATVMAEPRAKTVQITCAKQLEHNTTIFVPNFVSTMEKISEQMRTDGFGTAVAGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYNGGRIYLDGCFMRAENYSFFNEYTGPGDRAVCGNTTRKNSTFQAAAKQAVLSAVQDAPNNKGYAKGVVAVSGTANESAYVLADCWRTLDSSSCKACLENASSSILGCLPWSEGRALNTGCFMRYSDTDFLNKEAENGSSGGNVMVIVVAVVSSVVVTVVGVIIGAYVWKRRYIQKKRRGSYDPDKLAKTLQHNSLNFKYSTLDRATGSFHESNKLGQGGFGTVYKVFLSKPLSHHLAYQSHSYNLLLQGVLADGREIAIKRLYYNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDGFIFDKNKGRELNWEKRYEIITGTAEGLVYLHENSKVRIIHRDIKVSNILLDAKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKVDVYSFGVLLLEIVTGRQNNRSKESEYTDSLILVAWEHFQTGTAEQLFDPNIELHEAHNGNVKNEILRVIHIGLLCIQEIPSLRPTMSKVLQMLTKKEELLVAPSNPPFLDESTMALHDTSGDPLYPLNADDSIATMAHSSFYAR* | 703 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja2g0952 | 702 | Pfam | Protein tyrosine and serine/threonine kinase | 356 | 650 | IPR001245 | GO:0004672|GO:0006468 | |
Lja2g0952 | 702 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 497 | 509 | IPR008271 | GO:0004672|GO:0006468 | |
Lja2g0952 | 702 | ProSiteProfiles | Gnk2-homologous domain profile. | 62 | 163 | IPR002902 | - | |
Lja2g0952 | 702 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 392 | 683 | - | - | |
Lja2g0952 | 702 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 37 | 373 | - | - | |
Lja2g0952 | 702 | Gene3D | Transferase(Phosphotransferase) domain 1 | 452 | 660 | - | - | |
Lja2g0952 | 702 | CDD | STKc_IRAK | 359 | 653 | - | - | |
Lja2g0952 | 702 | SUPERFAMILY | Protein kinase-like (PK-like) | 337 | 672 | IPR011009 | - | |
Lja2g0952 | 702 | Gene3D | - | 173 | 273 | IPR038408 | - | |
Lja2g0952 | 702 | Gene3D | - | 61 | 163 | IPR038408 | - | |
Lja2g0952 | 702 | ProSiteProfiles | Protein kinase domain profile. | 353 | 658 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lja2g0952 | 702 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 | 392 | 683 | - | - | |
Lja2g0952 | 702 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 | 37 | 373 | - | - | |
Lja2g0952 | 702 | SMART | serkin_6 | 353 | 658 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lja2g0952 | 702 | Pfam | Salt stress response/antifungal | 176 | 270 | IPR002902 | - | |
Lja2g0952 | 702 | Pfam | Salt stress response/antifungal | 78 | 161 | IPR002902 | - | |
Lja2g0952 | 702 | Gene3D | Phosphorylase Kinase; domain 1 | 315 | 451 | - | - | |
Lja2g0952 | 702 | ProSiteProfiles | Gnk2-homologous domain profile. | 168 | 273 | IPR002902 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja2g0952 | Lja-Chr2 | 8941086 | 8945774 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja2g0952 | 46 | 702 | Receptor kinase-like Gene Family | AT1G70520 | 65.961 | 0.0 | 856 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Lja2g0952 | PK_Tyr_Ser-Thr | 9.5e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja2g0952 | - | - | lja:Lj2g3v1415230.1 | 1327.77 |