Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0951 ATGTCCTTTCCATTTCCATGGTTTCTTCTCCTCATCTTCCTCTGCCACCACCACCACCCCCTCCCTACTCTCGCCGACCCAAGAGCCACAGAGGCAGCATCACTATGCACCAACAGAACTTCACCAATGCCACAGAGCCAGCGCCAAGTTTTCTTATCAAATTTCTACGACGCCTTAGAATCCTTAACATCTCTGGTCACCACACAGAGACATGGAACCGTGGTTAAAGGGAGTAGTACTACTCAAAATGCCACCGTCTATGCTTTCGGTGAGTGCATGAAAGATCTCTCAAAATCAGACTGTGATGTCTGCTTCGCTCAGTGCAAGACACGTGTCCTGAGGTGCTCGCCTATTCAGAGAGGCGTTGAAGGTGGGAGATTCTTCTTTGATGGGTGCTATCTCAGGTATGATGCCTACAATTTCTTCAATCAGAGTCTAAGTTCTCAAGACTTGACCCTTTGTGGGAACATAGATTTTAGTGGAAATAGGAGTGTTCATAAGGCTAATGTAGTGGAGTTAGTGAGGAATTTGAGTGTGGAAGCACCAAAGAATGATGGGTTTTTTGTGGGGGTTTTGAGTAAAAGGAATGTGAGTGTTTATGGGTTAGCTCAGTGCTGGAATTTTGTGAATGAGAGTGTCTGTCAGAATTGCTTGGTTGAAGCTGTTACTAGGATCGATTCTTGTGCTCTGAAAGAAGAAGGGAGAGTATTGAATGCTGGATGTTACTTGAGGTTTTCAACAGACAAGTTCTATGATAATTCAAGCAACATTGCTCCTCCAGGGACTAAAGGAAGTACCAAGGTTGGTATAATTGTGGCTGAATCATTTGCCGCAGTGGCTACTCTGCTGATTGTTGCAACAATTATTTTCTTTGTGAGGAAGAATGTGCTGAGGCAGAGGAGAGAAAGAAGACAGTTTGGTGCATTTTTGTTCTCCGAAAACAATTCCAAATTAAATATGCCATATGAAGTCCTTGAAAAGGCGACAAATTACTTCCATGATTCCAATAAGCTAGGAGAAGGGGGATCAGGTTCAGTTTATAAAGGAGCTTTGCCAGATGGAACAACAGTGGCCATAAAAAGGCTTAGCTTTAATACAACACAATGGGCAGATCATTTCTTCAATGAGGTTAATTTGATCAAAGACCTTCAGCACAAAAATCTAGTGAAGCTTTTAGGGTGCAGCATCACAGGACCTGAAAGCCTTCTTGTTTATGAATATGTGCCCAACCTGAGCCTCCATGATCACCTATCTGTTAGAAGGAACCTTCAACAGCTGACATGGGAAGTCAGGCATAAGATCATATTGGGAACTGCAGAAGGTTTGGCCTATCTTCATGAGGAATCCCAATTGAAAATCATTCATAGAGATATAAAATTAAGCAACATTCTGCTTGATGATAACTTCACACCCAAGATTGCTGATTTTGGACTTGCAAGACTATTTCCTGAAGACCAGTCTCAGATAAGCACAGCCATTTGTGGCACACTGGGTTATATGGCTCCAGAGTACATAGTTCTAGGGAAGTTAACTGAAAAAGCAGATATCTACAGTTTTGGAGTTCTAGTTATTGAACTTCTATCTGGAAAAAGCAGAACATCCTTTGTTCAAAACTCATGTTCCATCCTACACATGGTTTGGAGCCTTTATGGATCAAATAGGCTTTGTGACATTGTTGATCCAATCCTGGAGGGAAATTATCCAGCAGAGGAAGCATGCAAACTCCTCAAGATAGGGCTGCTATGTACACAAGCATCTGCAGAGCTGCGACCACCAATGTCAGTGGTTGTGAAAATGATTAACAACATTCATAAAATTGCTGATCCAACACAACCACCGTTTCTTAATTTTGGCAGTGGAGAATTCAGCAGATCCTCTTTACCAGAAGAGAGTCTTCAGCCTGGATCTAACACTCAATCTTCAGGGGACAGCATGACCGAAAGTTCTGAGCATAGATTGGTTACTCTATAA 1971 0.4236 MSFPFPWFLLLIFLCHHHHPLPTLADPRATEAASLCTNRTSPMPQSQRQVFLSNFYDALESLTSLVTTQRHGTVVKGSSTTQNATVYAFGECMKDLSKSDCDVCFAQCKTRVLRCSPIQRGVEGGRFFFDGCYLRYDAYNFFNQSLSSQDLTLCGNIDFSGNRSVHKANVVELVRNLSVEAPKNDGFFVGVLSKRNVSVYGLAQCWNFVNESVCQNCLVEAVTRIDSCALKEEGRVLNAGCYLRFSTDKFYDNSSNIAPPGTKGSTKVGIIVAESFAAVATLLIVATIIFFVRKNVLRQRRERRQFGAFLFSENNSKLNMPYEVLEKATNYFHDSNKLGEGGSGSVYKGALPDGTTVAIKRLSFNTTQWADHFFNEVNLIKDLQHKNLVKLLGCSITGPESLLVYEYVPNLSLHDHLSVRRNLQQLTWEVRHKIILGTAEGLAYLHEESQLKIIHRDIKLSNILLDDNFTPKIADFGLARLFPEDQSQISTAICGTLGYMAPEYIVLGKLTEKADIYSFGVLVIELLSGKSRTSFVQNSCSILHMVWSLYGSNRLCDIVDPILEGNYPAEEACKLLKIGLLCTQASAELRPPMSVVVKMINNIHKIADPTQPPFLNFGSGEFSRSSLPEESLQPGSNTQSSGDSMTESSEHRLVTL* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0951 656 MobiDBLite consensus disorder prediction 622 656 - -
Lja2g0951 656 SMART serkin_6 332 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0951 656 SUPERFAMILY Protein kinase-like (PK-like) 319 631 IPR011009 -
Lja2g0951 656 ProSiteProfiles Gnk2-homologous domain profile. 30 141 IPR002902 -
Lja2g0951 656 CDD STKc_IRAK 338 603 - -
Lja2g0951 656 Gene3D Phosphorylase Kinase; domain 1 292 407 - -
Lja2g0951 656 Pfam Salt stress response/antifungal 36 138 IPR002902 -
Lja2g0951 656 Pfam Salt stress response/antifungal 162 247 IPR002902 -
Lja2g0951 656 Gene3D - 31 141 IPR038408 -
Lja2g0951 656 Gene3D - 150 250 IPR038408 -
Lja2g0951 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Lja2g0951 656 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 20 634 - -
Lja2g0951 656 ProSiteProfiles Gnk2-homologous domain profile. 147 250 IPR002902 -
Lja2g0951 656 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 20 634 - -
Lja2g0951 656 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Lja2g0951 656 ProSiteProfiles Protein kinase domain profile. 332 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0951 656 Gene3D Transferase(Phosphotransferase) domain 1 408 611 - -
Lja2g0951 656 Pfam Protein kinase domain 332 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0951 Lja-Chr2 8934502 8937294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0951 22 497 Receptor kinase-like Gene Family AT1G70530 58.281 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja2g0951 Pkinase 3.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0951 - - gmx:100802190 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0951 2 8934502 8937294 Lja2g0951 2 8934502 8937294 ECH