Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0942 ATGAAAATGGCAAGGATCATCCTTACCACCCTTTTCCTCTCCAACCTGCTCCTCGTTCCTTCAATAGCTTTTCCATTTCGGGAAGGAGGCGAGGGGGGCTTATTAGGACTTCAAAACGGGAATTTTCTAGGATTTCCATTCCCATTTCGACCAATTCAAGATCAGGACCCACCAAAGAATGAACAGCAGGAGAAGCCAGAGGAAGTTCAAAAGCCACAGGAATTTCAAGACCAGCCCAATACTATCAATCCCAATCTCAGGGAAGGATTCTACAGCGACAGCTGCCCCAATGCTGAGAAAATCATCGCTGACGCATTCGCCGAGATTGTCAGGACCAATCCAAAGGCAATGGCCAACATTCTTCGTCTTCAATTCCACGACTGCTTCGTTGTGGGGTGTGATGCATCGATCTTGCTAGACTCCACACCAAATGGTGACAATGTGGAAAAGAGTTCATTTTTTAACGGTATACTCCTGAAAGGTCCTGATCTGGTTGATGATATCAAGAGCAAATTAGAGGAAGAATGCCCTGGAATCGTGTCCTGCGCTGACACGATGGTGTTCCTGAGCTTCGAGGCGATGGCACTGGCGGGAATGCCCCGCCAGAAACCGCTCGGTGGTCGCAGGGACTCGCTCTACTCCCTCGCGACCGTAGTGGATGACAACAACCTACCAATGCCGAACTGGTCAGCAGATAAGATGGTAGAGCTCTTCCAGAGGAAAGGGTTCAGCCCAGAGGAAATGGTGATCTTGTTGGGAGCACATTCCATTGGTGCAGCTCACTGTGATATTTTCATGGACAGGGTGTATAACTTCAAGAACACTAACAAACCAGACCCTGCTCTGCGACCACCCTTCCTTAATGAACTCAGGCAGATTTGTTCCAACCCCGGGACACCGCGGTACAGGAACGAGCCGGTGAACTTTGACAACACGCCGACGGTGATGGACAACCTCTTCTACAGGGACTTGGTTGACAAGGGGAAATCATTGCTCCTAACTGATGCGCATTTGGTGACTGATCCAAGGACTGCACCTACTGTGGGGCAAATGGCTGATGATCAGGCATTGTTCCACAAGAGATTTGCTGAGGTGATGACTAAGTTGACTTCCTTGAACGTGTTGACAGGGAATGATGGAGAGGTGAGGAAGATTTGCAGGGCAACCAATTAA 1173 0.4928 MKMARIILTTLFLSNLLLVPSIAFPFREGGEGGLLGLQNGNFLGFPFPFRPIQDQDPPKNEQQEKPEEVQKPQEFQDQPNTINPNLREGFYSDSCPNAEKIIADAFAEIVRTNPKAMANILRLQFHDCFVVGCDASILLDSTPNGDNVEKSSFFNGILLKGPDLVDDIKSKLEEECPGIVSCADTMVFLSFEAMALAGMPRQKPLGGRRDSLYSLATVVDDNNLPMPNWSADKMVELFQRKGFSPEEMVILLGAHSIGAAHCDIFMDRVYNFKNTNKPDPALRPPFLNELRQICSNPGTPRYRNEPVNFDNTPTVMDNLFYRDLVDKGKSLLLTDAHLVTDPRTAPTVGQMADDQALFHKRFAEVMTKLTSLNVLTGNDGEVRKICRATN* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0942 390 CDD secretory_peroxidase 85 389 IPR033905 GO:0004601|GO:0042744
Lja2g0942 390 PANTHER PEROXIDASE 25-RELATED 68 388 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 PRINTS Haem peroxidase superfamily signature 309 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 PRINTS Haem peroxidase superfamily signature 180 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 PRINTS Haem peroxidase superfamily signature 117 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 PRINTS Haem peroxidase superfamily signature 198 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 SUPERFAMILY Heme-dependent peroxidases 86 390 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 MobiDBLite consensus disorder prediction 57 72 - -
Lja2g0942 390 MobiDBLite consensus disorder prediction 73 88 - -
Lja2g0942 390 PRINTS Plant peroxidase signature 246 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 PRINTS Plant peroxidase signature 119 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 PRINTS Plant peroxidase signature 95 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 PRINTS Plant peroxidase signature 324 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 PRINTS Plant peroxidase signature 198 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 PRINTS Plant peroxidase signature 364 377 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 PRINTS Plant peroxidase signature 179 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 PRINTS Plant peroxidase signature 160 173 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 Gene3D - 89 390 - -
Lja2g0942 390 MobiDBLite consensus disorder prediction 53 88 - -
Lja2g0942 390 ProSitePatterns Peroxidases proximal heme-ligand signature. 247 257 IPR019793 -
Lja2g0942 390 Gene3D Peroxidase, domain 2 225 369 - -
Lja2g0942 390 ProSiteProfiles Plant heme peroxidase family profile. 85 390 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 Pfam Peroxidase 106 354 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0942 390 PANTHER PEROXIDASE 68 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0942 Lja-Chr2 8846210 8847863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0942 86 390 Peroxidase AT5G17820 39.542 1.02e-69 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0942 K00430 - gmx:100802856 429.869