Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0931 ATGTTCGGATCCTCCCAACCCGCTCCCAAATCCTCCATCAAATTCCTCTGCAGCTACGGCGGCAAAATCCTCCCCCGTTACCCCGACGGCAAGCTCCGCTACCTCGGCGGCCACACCCGCGTCCTCGCCGTAGATCGCTCCATTCCATTTTCCGAACTCCTCTCGAAGCTGGAAGAGCTCTGCGGCTCCTCCGTGAGACACCTTCGCTGCCAGTTACCGGAGGAAGACCTTGACGCTTTGGTTTCCATCACTTCCGACGAGGATCTCGCCAACCTCGTCGAGGAATACGATCGCGTGGCGTCGCCGCCACCGTCCTCGTTGAAGATCCGAGTGTTCCTTCCGCCGCAGAGATCGTCGAACAAGGTTTCCACGCCGCATCCGTCTCTGTCAAAATCAGCATCTTCATCTTCGTCCACCTCATCCGCGTCCTCGGTGTCGTCTTCGTCATCATATTGCAGCCAGACCGGCGGTGGTTCTGGCCAGAGGAATACGGTGGCGACGGCTCCGGTGGTACACCGCTGTGTCCATCAGATGTCGCCGCCGACGGCGTATCCGGTTGGCGTGGAGCAATCTTTTCGAAGGAATAATATTCCTCTGCCTCGCCAGGGTTACCATGGTCAGGGAAACGGTGGCCACTCGTATCTGATCCACAACGGCAACCACTGGCAAAAAGATTAA 678 0.5796 MFGSSQPAPKSSIKFLCSYGGKILPRYPDGKLRYLGGHTRVLAVDRSIPFSELLSKLEELCGSSVRHLRCQLPEEDLDALVSITSDEDLANLVEEYDRVASPPPSSLKIRVFLPPQRSSNKVSTPHPSLSKSASSSSSTSSASSVSSSSSYCSQTGGGSGQRNTVATAPVVHRCVHQMSPPTAYPVGVEQSFRRNNIPLPRQGYHGQGNGGHSYLIHNGNHWQKD* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0931 225 MobiDBLite consensus disorder prediction 202 225 - -
Lja2g0931 225 CDD PB1_UP2 16 113 - -
Lja2g0931 225 SMART PB1_new 27 114 IPR000270 GO:0005515
Lja2g0931 225 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 5 222 - -
Lja2g0931 225 Gene3D - 31 113 - -
Lja2g0931 225 SUPERFAMILY CAD & PB1 domains 29 121 - -
Lja2g0931 225 PANTHER OS05G0427100 PROTEIN-RELATED 5 222 - -
Lja2g0931 225 MobiDBLite consensus disorder prediction 117 164 - -
Lja2g0931 225 Pfam PB1 domain 29 112 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0931 Lja-Chr2 8775607 8776402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0931 13 113 MAP Kinase Kinase Kinase AT5G57610 51.961 4.44e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0931 - - lang:109349167 273.092