Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0919 ATGGCAGAGAGGTTCACCAGTCCCACCTCCAACCTTCTCTGTTCCGAAGACAGGAGTACCTGCTTTCATGATGATGTTGATGATGATGGTTTGGTAGGACAGCAGGACCACACAAACGTTAGCTCTGATCATCACTGTCTGAGTCAGAACAACCATGGATCGGAGCCATTTGCGTGGTTTATGGTGCAGAGTGATGAAACTGTGAGGGTCATGGTGGAGAAGGAGAGGGAGCATTTGCCCAGGGATGATTATCTCAAGAGGCTGCGTAGTGGAGAATTGGACTTGAGTGTTAGAAGAGAGGCTCTTGACTGGATTTGGAAGGCTCATGCGTATTATGGTTTTGGACCCTTGAGCTTTTGTCTATCTGTGAACTACTTGGATCGCTTTCTATCAGTTTTCGAATTGCCGAGAGGCGTAAAATGGACTGTGCAATTGGTAGCTGTAGCTTGCTTGTCAATTGCAGCTAAAATGGAGGAAGTTAAAGTGCCTCAATCTGTAGATTTACAGGTTGGAGAACCAAAGTTTGTGTTTGAAGCTAAAACCATTCAAAAAATGGAACTTCTGGTATTAAGCACATTGAGATGGAAAATGCAAGCTTTAACTCCTTGTTCTTTCATTGAATACTTCCTTGGTAAGATCAATCACGAGAAGCATCCGGTAGGATCGTCCATTTCAAGATCATTGCAGCTCATCCTTATCATAATCAGAGGTATTGACTTCTTGGAATTCAAGCCTTCTGAAATTGCTGCAGCAGTGGCAATTTCTGTTTTAAGGGAATTGCAAGATCAAGAGATTGATAAGGCCATAACTGATTTCTACATTGTAGAGAAGGAGAGAGTTCTCAAGTGTCTTGAACTGATCAAAGACTTGTCCTTGATCAAAGTTGCTGCTAGTTTGGGCACTAAATCTTCTGCACCATTTATGCCTCAAAGCCCTATTGGGGTTTTAGATGCTGGATGCTTGAGCTCTAAGAGTGATGAGTTAACAGTTGGATCATGTCCAAATTCTTTGCATAATAGTCCAAATAACTAA 1032 0.4234 MAERFTSPTSNLLCSEDRSTCFHDDVDDDGLVGQQDHTNVSSDHHCLSQNNHGSEPFAWFMVQSDETVRVMVEKEREHLPRDDYLKRLRSGELDLSVRREALDWIWKAHAYYGFGPLSFCLSVNYLDRFLSVFELPRGVKWTVQLVAVACLSIAAKMEEVKVPQSVDLQVGEPKFVFEAKTIQKMELLVLSTLRWKMQALTPCSFIEYFLGKINHEKHPVGSSISRSLQLILIIIRGIDFLEFKPSEIAAAVAISVLRELQDQEIDKAITDFYIVEKERVLKCLELIKDLSLIKVAASLGTKSSAPFMPQSPIGVLDAGCLSSKSDELTVGSCPNSLHNSPNN* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0919 343 CDD CYCLIN 98 190 IPR013763 -
Lja2g0919 343 Pfam Cyclin, N-terminal domain 68 197 IPR006671 -
Lja2g0919 343 SUPERFAMILY Cyclin-like 182 288 IPR036915 -
Lja2g0919 343 SMART cyclin_7 103 191 IPR013763 -
Lja2g0919 343 ProSitePatterns Cyclins signature. 98 129 IPR006671 -
Lja2g0919 343 PANTHER CYCLIN-D4-1-LIKE 58 341 - -
Lja2g0919 343 Gene3D - 71 286 - -
Lja2g0919 343 Pfam Cyclin, C-terminal domain 201 291 IPR004367 -
Lja2g0919 343 SUPERFAMILY Cyclin-like 58 197 IPR036915 -
Lja2g0919 343 Gene3D - 81 198 - -
Lja2g0919 343 PANTHER CYCLINS 58 341 IPR039361 -
Lja2g0919 343 SMART Cyclin_C_2 200 324 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0919 Lja-Chr2 8598540 8600802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0919 21 268 Core Cell Cycle Gene Families AT5G65420 54.000 2.36e-92 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0919 K18810 - gmx:100794010 466.463