Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0902 ATGGATGCAACTCAAGCAGAAAAAATCTATGTTGCTATTAGCAATGATGCACAGGATGGATTTAACACTTTGAATTGGGCTCTCAGGAAATGGAATTCTCATCCAATTTCCATTGTGATTCTCCATGTGACACACAAGATTTCCATGGATTATGTTTACACACCATTTGGGAAACTTCCAGCAAAATCTGTGAATGATGAAAAGCTAGAAGTTCTCAGGAAAGATGAGAAAGAGAAAATCAAGAAGCTGTTTTCCAAGTATATATCTTTTTGTGGCAAGGTGCCAGCTGAAATTTTTGAAGTTGAGAAATTTGATGAGCCTATCCAAAAGCGCACCATAGACTTGATATTTGGTCTAGGAATAACCAAATTGGTCATAGGATTTTCATTCATGAAGCCTTCCTTGAAATCAAGAGGTGCCATGAGTGGATTGTTCTATGTTCATCAGCACAAGCCTGCATTCTGTGATTTGTTTATTATTTGTGCTGGGAAGCAAGTTTATCTCAGAGGAAATAATGATGAGCAAATCATGGAAGATGATAAGGGAGTCATGGTTGCCAGAATGAGAGATAAGATCACTTTTAAAGATTGGCTAGACAAAATGTTCAATGACAAAAACAATGATTCCTTAGATAGAACTGCATCTCCTTCCTCAAACAATTTGGATTCCTCTGTGACACAAAATCACTGGGAGTCTTGTCTCCAAGAAATTGATAATTACTATCAACAATTGCTATCTTCATCAAATTTGGATGATGGAACCTGCAGGCAGGACAATGATCCAATTGAGCCAGATGTCACTGAAAGGAACTACTCTATTAAGAGTGCAGCAGAAAAAATTGAGATCCTGAAAAATAAACTGAACGAAGCTCGAAAAACAATCCAATTGAAGAGGAAAGAAGCCAAGGACAACCTAGAGAGACAAACAAAAGCTGAATGGGCAATTTTATTATGCAACAGTCGGGCAGAAGAAGTTGAAGGTCAAATAAGGGAAGAGGTAAGCACAAAGGAAGAACTAAAGAAGGAAGTGGAAGCAGAGAAAGAGCAAATAAAGGAAATGAAAATTGAGATTGAAGAGAGGAAGAGGAGGGCAGGTTCACTAACAGGACTCCAACGCGAGATGTCAAGCAGGCTCCAAATGTCGACGTTGGCGAGGTCAGGAGCGGAGGCACAACTAGAGAGAGCAGTGAGTGAAAGGAGGGATATGGTGAGGGAGATAGAGGAGCTGCGGAGGCAGAGGGATGTATTGAAGAGGAGGATCGAGTTCTGCAAGCAGAAAGATGCCATAAGCATGGCGGCGAGGATGAGTGACACATGTTGTAGTTTTAGGGAGTACACAGAGGAGGAGCTGAGGTTGGCCACCGAAAACTTCTCCGAGCGGCTGAGGTTGAAGTCCGGTGGGGATTGGACCAACGTATATAGAGGACACTTCAACCACTCGACTTTTGCAGTCAAAATGCTCCCTTCTTATGCTTCTTTGTCTCACCAATATTTTCATTCCAAGATGAGGCTTCTAGGTGATATTAGGCAACCTCATCTGGTTGCCATGGTGGGCTTTTGCTCTGAGCCCAAATGCTTAGTTTTGGAATACTTGTGCAACGGAAGCTTGCGAGACATGCTATTTTCTAGGAGACGAAGCCGGGCCTTACGGTGGCATGACCGGATACGAATAGCGACAGAAGTTTGCTCAGGCTTGGGCTATCTCAACGCAGCAAAGCAGAGGCCTGTTATTCATTGTCATTTGAGCCCAGCCAACGTCCTCCTAGACCGCAATCTGGTTGCGAAGATCACGGGCTTCGGGCTTCACGAGTGCCATGACGAGGAATGTAACGCGGAGACAGATTTGAGGGCCGTAGGGGTTTTGTTGCTGCAGCTTCTAACCGGAAGAAATTGGGTCGGGCTCGTTGACGAGGCCCTGATATCAGACATGGATACAGAGGCACTGGTTAAAGTTCTTGATGACATGGCTGGACAATGGCCATTGAATCTAGCGAAAGAGCTCGTGAACCTAGCTATCAGGTGCATGTCTATGACAGGCAAGCCCAACCCAGATTTTAGCATTGCAAGTGTCTTGAAGGAACTCAATAAGATTAGAAGAAAGGGTGATGAAATATTTACAAGGGAAGGACAAAAAGTAATCAATGGAGGGTGTATAGATAGAGAGAGCTCTAGCGATGTGCCTAGTGTGTTCATTTGCCCTATTCTGCAGGATGTGATGAAAAACCCACACGTGGCGGCAGATGGGTTTTCTTATGAGCTGGAAGCAATAGAACAGTGGTTGCAGTCAGGGAATGAAAGATCACCTATGACAAATTTAAGGATGAAGCACACATTCCTTACTCCGAATCACACTCTTCGTTCCTTAATTGATGATTGGCAGGAAAAATCAGCCAACGTTGAAAATTAA 2406 0.4343 MDATQAEKIYVAISNDAQDGFNTLNWALRKWNSHPISIVILHVTHKISMDYVYTPFGKLPAKSVNDEKLEVLRKDEKEKIKKLFSKYISFCGKVPAEIFEVEKFDEPIQKRTIDLIFGLGITKLVIGFSFMKPSLKSRGAMSGLFYVHQHKPAFCDLFIICAGKQVYLRGNNDEQIMEDDKGVMVARMRDKITFKDWLDKMFNDKNNDSLDRTASPSSNNLDSSVTQNHWESCLQEIDNYYQQLLSSSNLDDGTCRQDNDPIEPDVTERNYSIKSAAEKIEILKNKLNEARKTIQLKRKEAKDNLERQTKAEWAILLCNSRAEEVEGQIREEVSTKEELKKEVEAEKEQIKEMKIEIEERKRRAGSLTGLQREMSSRLQMSTLARSGAEAQLERAVSERRDMVREIEELRRQRDVLKRRIEFCKQKDAISMAARMSDTCCSFREYTEEELRLATENFSERLRLKSGGDWTNVYRGHFNHSTFAVKMLPSYASLSHQYFHSKMRLLGDIRQPHLVAMVGFCSEPKCLVLEYLCNGSLRDMLFSRRRSRALRWHDRIRIATEVCSGLGYLNAAKQRPVIHCHLSPANVLLDRNLVAKITGFGLHECHDEECNAETDLRAVGVLLLQLLTGRNWVGLVDEALISDMDTEALVKVLDDMAGQWPLNLAKELVNLAIRCMSMTGKPNPDFSIASVLKELNKIRRKGDEIFTREGQKVINGGCIDRESSSDVPSVFICPILQDVMKNPHVAADGFSYELEAIEQWLQSGNERSPMTNLRMKHTFLTPNHTLRSLIDDWQEKSANVEN* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0902 801 Coils Coil 385 426 - -
Lja2g0902 801 SUPERFAMILY RING/U-box 722 796 - -
Lja2g0902 801 Gene3D Phosphorylase Kinase; domain 1 428 530 - -
Lja2g0902 801 PANTHER OS02G0152300 PROTEIN 5 795 - -
Lja2g0902 801 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 724 800 IPR013083 -
Lja2g0902 801 Gene3D Transferase(Phosphotransferase) domain 1 532 706 - -
Lja2g0902 801 CDD RING-Ubox_WDSUB1_like 730 771 - -
Lja2g0902 801 Pfam U-box domain 726 795 IPR003613 GO:0004842|GO:0016567
Lja2g0902 801 ProSiteProfiles U-box domain profile. 725 799 IPR003613 GO:0004842|GO:0016567
Lja2g0902 801 SMART Ubox_2 729 792 IPR003613 GO:0004842|GO:0016567
Lja2g0902 801 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 50-RELATED 5 795 - -
Lja2g0902 801 Coils Coil 273 311 - -
Lja2g0902 801 Pfam Protein tyrosine and serine/threonine kinase 467 608 IPR001245 GO:0004672|GO:0006468
Lja2g0902 801 SUPERFAMILY Protein kinase-like (PK-like) 440 685 IPR011009 -
Lja2g0902 801 ProSiteProfiles Protein kinase domain profile. 458 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0902 801 Coils Coil 322 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0902 Lja-Chr2 8436064 8440414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0902 3 797 U-box Gene Family AT5G65500 49.071 0.0 752
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lja2g0902 PK_Tyr_Ser-Thr 4.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0902 - - gmx:100786771 1187.94