Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0889 ATGGCGTCACAACCAGAGATGGAACACCCCAAGAAAGCTTTCGGCTGGGCAGCACGGGACTCATCTGGTGTTCTCTCCCCTTTCAAATTCTCCAGAAGGGAAACAGGAGAGAAGGATGTGACATTCAAAGTGCTGTATTGTGGAATTTGTCACTCTGATCTTCACATGATCAAGAATGAGTGGGGATCTTCCGTCTACCCACTAGTACCTGGGCATGAGATTGCTGGTGTGGTGACAGAGGTGGGTAGCAAGGTGCAAAAGTTCAAAGTTGGAGACAGAGTTGGTGTGGGATGCATGGTTAACTCCTGCCGCTCATGCCAAAGCTGTGCTGATAATCTTGAGAATTACTGCCCCAAAATGATTCTGACATATGCTGCCAAGAATGTTGATGGCACCATCACATATGGAGGCTATTCTGACTTGATGGTTTCGGATGAAGACTTTGTGATCCGCATTCCGGATAACCTACCACTTGAAGCTGCTGCACCTCTCCTATGTGCTGGGATCACAGTGTATAGCCCTTTGAAATATTATGGACTTGACAAGCCTGGTCTTCATGTGGGTGTGGTTGGTCTTGGTGGGCTAGGCCACATGGCTGTGAAGTTTGCCAAAGCCCTTGGAGCTAAGGTCACTGTGATTAGTACATCTCCTAACAAGAAGACTGAGGCAATTGAAAAGTTAGGAGCTGACTCATTTGTGGTTAGCCGTGAACAAGATCAGATGAAGGCTGTAATGGGAACCTTTGATGGTATCATTGACACTGTTTCAGCTGTCCATCCTCTCTTGCCTCTGATTAGTCTGTTGAAGCCTCATGGCAAACTTGTCATGGTTGGTGCACCAGAGAAGCCTCTGGAGGTGCCAGTGTTCTCTTTACTTGGAGGGAGAAAGACAATTGCTGGCAGTATGATTGGAGGGATTAAGGAGACACAAGAAATGATTGATTTTGCTGCCAAACATGATGTGAAACCTGAGATTGAGGTGATTCCAATGGATTATGTGAACACTGCAATGGAGCGCCTTCTCAAAGCAGATGTGAAATATCGGTTTGTTATTGACATTGGAAACACTCTGAAGGCAAGCTCATCAATATAA 1092 0.4606 MASQPEMEHPKKAFGWAARDSSGVLSPFKFSRRETGEKDVTFKVLYCGICHSDLHMIKNEWGSSVYPLVPGHEIAGVVTEVGSKVQKFKVGDRVGVGCMVNSCRSCQSCADNLENYCPKMILTYAAKNVDGTITYGGYSDLMVSDEDFVIRIPDNLPLEAAAPLLCAGITVYSPLKYYGLDKPGLHVGVVGLGGLGHMAVKFAKALGAKVTVISTSPNKKTEAIEKLGADSFVVSREQDQMKAVMGTFDGIIDTVSAVHPLLPLISLLKPHGKLVMVGAPEKPLEVPVFSLLGGRKTIAGSMIGGIKETQEMIDFAAKHDVKPEIEVIPMDYVNTAMERLLKADVKYRFVIDIGNTLKASSSI* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0889 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Lja2g0889 363 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Lja2g0889 363 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Lja2g0889 363 Gene3D - 16 353 - -
Lja2g0889 363 CDD CAD1 14 352 - -
Lja2g0889 363 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Lja2g0889 363 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 360 - -
Lja2g0889 363 Gene3D - 167 323 - -
Lja2g0889 363 PANTHER ALDEHYDE REDUCTASE 1 360 - -
Lja2g0889 363 SUPERFAMILY GroES-like 20 184 IPR011032 -
Lja2g0889 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0889 Lja-Chr2 8302685 8305282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0889 11 363 Monolignol Biosynthesis Gene Families AT4G37990 73.088 5.36e-179 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0889 - K23232 gmx:100809071 618.616