Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0875 ATGATGGAGTTACCAGCTACTAGGATATTAAGTCAGGCTGTGACATGCTTTCTCTGTCTGTATATATTTATCGGATCAGCTTCTGCAACTGAAGGGTTTGAGAGCATAGCGTGCTGTGCTGATTTGAATTACACAGATCCGCTTACCACCTTAAATTACACAACAGATTACACCTGGTTCTCTGATAAAAGAAGTTGCAGAAAAATACCTGAAACTGAGTTAAGAAATAGAAGCAATGAAAATGTTCGACTGTTCGATATAGATGAGGGGAAGAGATGTTACAATCTGCCAACAATTAAGAATGGAGTGTATCTGATAAGGGGCACATTTCCATTTGACAGTTTAAATTCTTCCTTCAATGCTTCAATTGGAGTAACACAATTAGGTGCAGTGAGATCATCCAGGCTCCAGGACTTGGAAATAGAGGGAGTTTTTAGAGCTACCAAAGATTACATAGACTTCTGCTTATTGAAGGGGGAGGTTTATCCCTTTATTTCTCAGCTTGAATTAAGGCCATCACCTGAAGAGTACCTACAAGATTTTCCTACCAGTGTTTTAAAACTGATAAGCAGGAACAACCTTGGGGACACTAAAGATGACATCAGGTTCCCAGTTGACCAAAGTGACCGAATCTGGAAAGCAAGTTCAATTTCTTCATCTGCTGTTCCTCTGTCTTCCAATGTCAGCAATGTTGATCTCAACGCCAATGTAACGCCGCCCCTAACAGTCCTACAAACAGCTCTAACCGACCCTGAGCGATTGGAGTTCATCCACACTGACCTTGAGACAGAGGATTATGGATACCGTGTGTTCCTCTACTTCCTTGAATTAGATAGAACTCTACAAGCAGGCCAAAGGGTGTTTGACATATATGTTAACAGTGAGATTAAAAAGGAGAGTTTTGATGTATTGGCTGGAGGGTCAAACTATAGATACGATGTCTTGGACATTTCAGCCAGTGGATCACTTAATGTAACCTTGGTCAAGGCATCTAAGTCTGAGTTTGGACCCCTTTTGAATGCTTATGAGATCCTGCAGGTGCGACCGTGGATTGAAGAGACAAACCAAACAGATGTGGGAGTGATTCAGAAGATGAGAGAAGAATTGTTGTTGCAAAACTCCGGCAATAGAGCGCTGGAGAGTTGGAGCGGAGACCCTTGTATTCTGCTCCCATGGAAAGGAATAGCATGTGATGGTTCAAATGGTTCATCTGTTATCACTAAGCTGGATCTTTCCTCAAGTAATCTCAAGGGACTAATACCTTCCAGCATTGCTGAGATGACCAACTTAGAAACACTGAACATAAGCCACAACAGTTTCGATGGTTCTGTCCCCTCATTTCCACTGTCGTCCTTGTTGATATCAGTAGATCTGAGCTACAACGATCTTATGGGAAAGCTTCCAGAGTCTATTGTCAAACTGCCACATTTAAAATCATTATATTTTGGCTGCAACGAACACATGAGTCCAGAGGATCCAGCAAATATGAACAGTTCACTAATCAATACAGATTATGGAAGATGCAAAGGGAAAGAATCCAGATTTGGACAAGTAATTGTTATTGGTGCCATTACATGTGGATCACTTTTGATTACTTTGGCTTTTGGAGTTCTTTTTGTATGCCGCTACAGACAAAAATTAATTCCATGGGAAGGATTTGCTGGAAAGAAGTACCCAATGGAAACAAATATAATTTTCTCTTTGCCAAGCAAAGATGATTTCTTCATAAAGTCCGTATCAATTCAAGCATTCACCTTGGAGTATATAGAGGTGGCCACAGAGAGGTACAAAACCTTGATAGGTGAAGGAGGGTTTGGCTCTGTTTACAGGGGTACTCTAAATGATGGCCAAGAAGTGGCGGTGAAAGTGCGGTCAGCGACATCAACTCAGGGAACTCGAGAATTTGATAATGAGCTAAACCTACTTTCAGCAATACAGCATGAGAACCTGGTGCCACTTCTTGGTTACTGTAATGAAAGTGATCAACAAATTCTAGTGTATCCTTTCATGTCCAATGGTTCTTTGCAAGATAGACTATATGGGGAACCTGCAAAGAGAAAAATATTAGACTGGCCAACTAGACTCTCTATTGCTCTTGGTGCAGCTCGAGGTCTGGCATATCTGCACACATTTCCAGGACGTTCTGTAATACACAGGGACATAAAATCAAGCAATATACTTCTGGATCATAGCATGTGTGCTAAGGTTGCAGATTTTGGTTTCTCAAAATATGCTCCACAGGAAGGAGATAGTTATGTCTCCCTTGAAGTAAGAGGAACTGCAGGGTACCTGGATCCTGAGTACTACAAAACCCAGCAACTATCTGAAAAGAGTGATGTTTTCAGCTTTGGTGTGGTCTTGCTTGAAATTGTGAGTGGCCGGGAACCTCTCAACATAAAGAGACCCCGGACTGAGTGGAGCTTGGTTGAATGGGCAACACCATATATCAGAGGGTCAAAGGTGGATGAAATTGTGGATCCTGGCATTAAGGGAGGATACCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACTGCAATGTCTTGAACCTTTCTCAACATACAGACCAAGCATGGTCGCCATTGTTCGCGAGTTGGAGGATGCTCTCATAATAGAAAACAATGCATCTGAGTACATGAAGTCCATAGACAGCCTTGGAGGATCGAACCGCTACTCTATTGTCATAGAGAAAAGGGTGCTCCCCTCAACTACATCTACAGCAGAATCAACCATCACAACACAGTCCTTGTCTCACCCACAGCCGAGATAG 2772 0.4235 MMELPATRILSQAVTCFLCLYIFIGSASATEGFESIACCADLNYTDPLTTLNYTTDYTWFSDKRSCRKIPETELRNRSNENVRLFDIDEGKRCYNLPTIKNGVYLIRGTFPFDSLNSSFNASIGVTQLGAVRSSRLQDLEIEGVFRATKDYIDFCLLKGEVYPFISQLELRPSPEEYLQDFPTSVLKLISRNNLGDTKDDIRFPVDQSDRIWKASSISSSAVPLSSNVSNVDLNANVTPPLTVLQTALTDPERLEFIHTDLETEDYGYRVFLYFLELDRTLQAGQRVFDIYVNSEIKKESFDVLAGGSNYRYDVLDISASGSLNVTLVKASKSEFGPLLNAYEILQVRPWIEETNQTDVGVIQKMREELLLQNSGNRALESWSGDPCILLPWKGIACDGSNGSSVITKLDLSSSNLKGLIPSSIAEMTNLETLNISHNSFDGSVPSFPLSSLLISVDLSYNDLMGKLPESIVKLPHLKSLYFGCNEHMSPEDPANMNSSLINTDYGRCKGKESRFGQVIVIGAITCGSLLITLAFGVLFVCRYRQKLIPWEGFAGKKYPMETNIIFSLPSKDDFFIKSVSIQAFTLEYIEVATERYKTLIGEGGFGSVYRGTLNDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNESDQQILVYPFMSNGSLQDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDIKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRTEWSLVEWATPYIRGSKVDEIVDPGIKGGYHAEAMWRVVEVALQCLEPFSTYRPSMVAIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVIEKRVLPSTTSTAESTITTQSLSHPQPR* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0875 923 SMART serkin_6 594 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0875 923 SUPERFAMILY L domain-like 379 488 - -
Lja2g0875 923 PANTHER OS07G0107800 PROTEIN-RELATED 62 884 - -
Lja2g0875 923 Gene3D Phosphorylase Kinase; domain 1 566 669 - -
Lja2g0875 923 Gene3D Transferase(Phosphotransferase) domain 1 670 883 - -
Lja2g0875 923 CDD STKc_IRAK 600 867 - -
Lja2g0875 923 Pfam Leucine Rich Repeat 429 447 IPR001611 GO:0005515
Lja2g0875 923 ProSitePatterns Protein kinases ATP-binding region signature. 600 622 IPR017441 GO:0005524
Lja2g0875 923 SUPERFAMILY Protein kinase-like (PK-like) 574 866 IPR011009 -
Lja2g0875 923 Gene3D Ribonuclease Inhibitor 358 510 IPR032675 -
Lja2g0875 923 ProSiteProfiles Protein kinase domain profile. 594 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0875 923 Pfam Malectin-like domain 41 347 IPR024788 -
Lja2g0875 923 Gene3D - 188 348 - -
Lja2g0875 923 PANTHER OS05G0525400 PROTEIN 62 884 - -
Lja2g0875 923 Pfam Protein tyrosine and serine/threonine kinase 598 866 IPR001245 GO:0004672|GO:0006468
Lja2g0875 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 716 728 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0875 Lja-Chr2 8186460 8192547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0875 13 873 Receptor kinase-like Gene Family AT1G67720 34.260 7.00e-134 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lja2g0875 Malectin_like 7.2e-46 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0875 - - gmx:100781986 1526.53