Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0874 ATGCCTCAAGCCAACGGCTATCGTGATGAGACTGTAATTGACATAAAGAAACCGGTGAGTTTCACCGGGGGTGTTGAGTTTGAAAGCCTTACATATACTGTGAGAAAGAAGAAGAAGGTTGATGGGAAGTGGTCCAGTGAAGATGTGGACTTGCTGCATGATATCACTGGTTATGCACCAAAAGGTTGCGTCACTGCAGTGATGGGGCCTAGTGGTGCAGGGAAGTCCACTTTTCTTGATGGACTAGCTGGGAGAATTGCAAGTGGGAGCCTTAAAGGGAAGGTGTCCTTAGATGGGACAACTGTGAGCCCAAGCTTGATCAAAAGAACCTCTGCTTATATCATGCAGGAAGATAGGCTTTATCCAATGCTCACTGTCTATGAAACTTTGATGTTTGCTGCTGATTTTCGCTTGGGGCCACTTTCTCTTGCTGATAAGAAGCAGAGAGTAGAGAAGCTCATTGACCAGCTTGGCTTATCCTCATCTAGGAACACCTACATAGGAGATGAAGGGACAAGAGGGGTGTCCGGTGGAGAGCGTCGCAGGGTCTCAATTGGGGTTGACATCATTCACGGACCATCACTTCTGTTTCTGGACGAGCCAACTTCAGGACTAGACTCCACCAGTGCTAACAGTGTGATTGAGAAGGTGCATGACATTGCGCGCAATGGAAGCACCGTGATCCTCACCATTCACCAGCCCTCATCCAGAATCCAGTTGCTCCTCGACCATCTCATTATCCTTGCTAGAGGCCAGCTCATGTATCAAGGGTCACCTAAAGATGTGACCCTCCACTTGGGTCGCATGGCGCGCAAGGTCCCCAAAGGTGAGAACCCAATTGAGCATCTCATTGATGTTATCCAAGAGTATGATCAGTCCGAACTAGGAGTTGAGGCACTCGCTGAGTTTGCACGCACAGGGATGAAACCACCTCATTTGTCTGAATTTTCACTGTTTTCTGCTGCACCTTCACCATCCCCATCTTTACACCGTGATGAAAAATCTCAAGACTTCTCTTACTCATCACAAGTAAGTAGAAAAGGCCAAGAGGATTTTGATCACAGTGTGAGGAGTCTCAATAATACCTCAATGTCATGGAGCGCCAGCCATAGTGCAGCTTTTCTAAAATTCACTCCTTCAAAACTTAAAAAGGATAACAAGGTGCAGAAGCCCACCACAAGTCAAGCTTCCCCTGGCTACTACTACGCCTACTCGAGTGAAATCCTCCCAGCAACTCCAACACCACACAGCAGTGACTACACAGTGAATGAGAATGACTACCTGACACCCCCAAATTCAAAACTTGAACATCTTGGTCCAAAGTTTGCAAATTCCTACACAAGAGAGATTTGGATCCTGATGCGCCGCAACTTCATAAACATAAGGAGGACCCCTGAGCTTTTCCTGTCAAGACTCATGGTCCTCACCTTCATGGGTTTCATGATGGCCACCATGTTCCACAACCCCAAAGAGTCCTTGCAAGGAATCACGAACCGTCTCAGCTTCTTCATCTTCACCGTGTGCCTCTTTTTCTTCTCTTCCAATGATGCCGTCCCGGCCTTCATCCAAGAGAGGTTCATCTTCATCCGCGAGACTTCACACAATGCCTACAGAGCTTCCTCCTACACCTTTGCAGGCCTAATCACCCACATGCCATTTCTTGCTCTCCAAGCTTCAGCTTATGCAGGCATTGTTTGGTTTGCTTTGCAGCTTAGAGGCCCTTTTCTCTACTTCTTGCTTCTTCTCTTCCTTTCTCTCCTCTCAACCAATTCATTCGTTGTGTTTGTGAGCTCGGTCGTTCCGAACTACATCTTGGGGTATGCAGCGGTTATCGCCTTCACTGCCCTCTTCTTCTTGTTTTGTGGATACTTCTTGAACAGCAATGATATGCCACATTATTGGCGTTGGATGAACAAGATTTCAACAATGACATACCCTTATGAGGGGCTCTTGATGAACGAGTACCAGACCAATATTTCCTTTGCAAATGATGAAATTAACATCACCGGTTTTGATATCTTGAAAAGTCTTGATATTTCAACTGAAGGATACAAGAAGAGGAACAATGTGCTCATAATGTTAGGTTGGGCTGTGTTATATAGGGTCTTGTTTTATTTAGTCCTTCGTTTTGCATCCAAAAACCAGAGGAGGTAG 2154 0.4619 MPQANGYRDETVIDIKKPVSFTGGVEFESLTYTVRKKKKVDGKWSSEDVDLLHDITGYAPKGCVTAVMGPSGAGKSTFLDGLAGRIASGSLKGKVSLDGTTVSPSLIKRTSAYIMQEDRLYPMLTVYETLMFAADFRLGPLSLADKKQRVEKLIDQLGLSSSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSANSVIEKVHDIARNGSTVILTIHQPSSRIQLLLDHLIILARGQLMYQGSPKDVTLHLGRMARKVPKGENPIEHLIDVIQEYDQSELGVEALAEFARTGMKPPHLSEFSLFSAAPSPSPSLHRDEKSQDFSYSSQVSRKGQEDFDHSVRSLNNTSMSWSASHSAAFLKFTPSKLKKDNKVQKPTTSQASPGYYYAYSSEILPATPTPHSSDYTVNENDYLTPPNSKLEHLGPKFANSYTREIWILMRRNFINIRRTPELFLSRLMVLTFMGFMMATMFHNPKESLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTFAGLITHMPFLALQASAYAGIVWFALQLRGPFLYFLLLLFLSLLSTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLNSNDMPHYWRWMNKISTMTYPYEGLLMNEYQTNISFANDEINITGFDILKSLDISTEGYKKRNNVLIMLGWAVLYRVLFYLVLRFASKNQRR* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0874 717 Pfam ABC-2 type transporter 232 289 IPR043926 GO:0140359
Lja2g0874 717 ProSitePatterns ABC transporters family signature. 175 189 IPR017871 GO:0005524
Lja2g0874 717 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 8 711 - -
Lja2g0874 717 Pfam ABC-2 type transporter 449 655 IPR013525 GO:0016020|GO:0140359
Lja2g0874 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 263 IPR027417 -
Lja2g0874 717 CDD ABCG_EPDR 25 257 - -
Lja2g0874 717 Pfam ABC transporter 52 203 IPR003439 GO:0005524
Lja2g0874 717 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 25 275 IPR003439 GO:0005524
Lja2g0874 717 Gene3D - 27 273 IPR027417 -
Lja2g0874 717 MobiDBLite consensus disorder prediction 324 351 - -
Lja2g0874 717 SMART AAA_5 61 259 IPR003593 -
Lja2g0874 717 PANTHER ABC TRANSPORTER G FAMILY MEMBER 19 8 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0874 Lja-Chr2 8176134 8180201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0874 24 356 Calmodulin-binding Proteins AT2G36910 26.113 2.36e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0874 K05681 - gmx:100804809 1102.43