Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0842 ATGGCAATAGAAAACCAAGACAACACCACTGTCCGGGAAATCAAGCCCAAGAACAGGAGAATCATGGGTGCTGGAGGACCTGAAGAAGATGACAACAGGTGGCCACCATGGTTGAAGCCTCTGCTGAAAGAGAACTTCTTTGTTCAATGCAAGTTTCACGCTGATTCCCACAAGAGTGAATGCAACATGTATTGCTTGGACTGTATGAACGGTGCTCTCTGCTCTCTCTGCCTCGGTCACCACAAGGATCACCGTGCAATCCAGATTAGGAGGTCCTCCTACCATGATGTGATCAGGGTCTCTGAGATTCAGAAGGTGCTGGACATCACTGGCGTCCAGACCTACATTATCAACAGCGCAAGGGTGGTGTTCTTGAATGAGAGGCCTCAGCCAAGGCCTGGGAAAGGTGTCACCAACACTTGTGAAGTCTGTGAGCGCAGCCTTCTTGATTCTTTCCGCTTCTGTTCTCTGGGTTGCAAGATTGTTGGAACTTCCAAGAATTTTGAAAAGAAGAAGAAGCTCTCAGTGGCAATGGCATCAGATTCTGAGGATTCATACAGCAGCAACAGTAACCATGGCAGGAAGAACATTCACAACAACCACAACAACAACAACAACAAAGTCCAGAGCTTCTCACCATCCACACCGCCTCCAACTTCAGTTAATTACAGAACAGCCAAGAGGAGGAAGGGAATACCTCACAGAGCCCCAATGGTGGGGCTAGTCATAGAATATTAG 738 0.4797 MAIENQDNTTVREIKPKNRRIMGAGGPEEDDNRWPPWLKPLLKENFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLGHHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFEKKKKLSVAMASDSEDSYSSNSNHGRKNIHNNHNNNNNKVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMVGLVIEY* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0842 245 MobiDBLite consensus disorder prediction 1 30 - -
Lja2g0842 245 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 241 - -
Lja2g0842 245 MobiDBLite consensus disorder prediction 180 222 - -
Lja2g0842 245 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 241 - -
Lja2g0842 245 Pfam PLATZ transcription factor 90 161 IPR006734 -
Lja2g0842 245 MobiDBLite consensus disorder prediction 179 232 - -
Lja2g0842 245 MobiDBLite consensus disorder prediction 10 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0842 Lja-Chr2 7861319 7863666 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lja2g0842 PLATZ 5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0842 - - gmx:100791221 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0842 2 7861319 7863666 Lja2g0842 2 7861319 7863666 ECH