Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0813 ATGGAGCTATTCCCAGCACAACCAGACTTGTCTTTGCAAATTAGTCCTCCAAATTCCAAACCCACCACATCAAGTTGGAAAAGAAGCACAGAGGAAGACATGGATTTGGGGTTCTGGAAGAGAGCTTTGGAATCCAGAAGCTCCATGTCAACTTCATCAATGGCGAAAAAAGATACCGGCTTCTTCGACCTTTCCCTCTCCAATCCAAGGCCTTCAGAATCAAACACCACCATTCATCATGCTAATAACGCCATTGCCAACAACAGCAACAACAACCACTTCCAATCTTTTCAGCAAAACCATTACTTTCAACCACTCTTCCACCAACAACCACTTCAGCACCAAAGCTTGAGCCAAGAACTCGGTTTTCTCAGACCCATCAGGGGAATCCCGGTGTACCAAAACCCCCCTCCGATGATGCCATTCACCACTCAACCACATCATCTTCTAGAACCTTCTTCCACACCTTCTTCTCTAATTTCCAACACCAACACCGGTTCTCCAACCCCTAATTTTCCATCTCAGGCTCTGATGCGGTCCAGGTTCTTGTCTCGCTTCCCCGCGAAACGAAGCATGAGAGCTCCGAGGATGCGGTGGACTACCACGCTCCACGCTCGCTTCGTCCACGCTGTTGAGCTCTTAGGCGGGCATGAAAGGGCTACCCCAAAATCAGTGCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCCCATGTCAAGTCTCACTTACAGATGTATCGGACGGTGAAGACTACAGATAGAGCAGCAGCTTCTTCAGGGCAATCAGATGTGTACGACAATGGATCATCTGGAGATAATTCTGATGACTTAATGTTTGACATCAATTCTTCAAGAAGGCCTGAACTATCTATTAAGCAGGGAAGATCAAATGTTGTTAATCAAGAGAAGGAATGTCATGGGCTTTGGAGCAATTCTTCAAGGGAAGCTTGGTTGCATGGCAAGCCAAAGAATGATTCTGTTGGAAACACACCTTCTCTTGAGAAGGAAATGGATCCAAAGTGCCTAAGCTATGAGAGAATATCAGATGGAAGCTCATCCTCAAACCTTTCAGGATCAAGCCCGAAGAAACTTAATTTGGATTTGGGATTCACTTTGGGCCAACCTCTTTGA 1131 0.4607 MELFPAQPDLSLQISPPNSKPTTSSWKRSTEEDMDLGFWKRALESRSSMSTSSMAKKDTGFFDLSLSNPRPSESNTTIHHANNAIANNSNNNHFQSFQQNHYFQPLFHQQPLQHQSLSQELGFLRPIRGIPVYQNPPPMMPFTTQPHHLLEPSSTPSSLISNTNTGSPTPNFPSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDNSDDLMFDINSSRRPELSIKQGRSNVVNQEKECHGLWSNSSREAWLHGKPKNDSVGNTPSLEKEMDPKCLSYERISDGSSSSNLSGSSPKKLNLDLGFTLGQPL* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0813 376 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 375 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lja2g0813 376 MobiDBLite consensus disorder prediction 1 30 - -
Lja2g0813 376 MobiDBLite consensus disorder prediction 11 25 - -
Lja2g0813 376 MobiDBLite consensus disorder prediction 346 364 - -
Lja2g0813 376 MobiDBLite consensus disorder prediction 253 280 - -
Lja2g0813 376 Pfam Myb-like DNA-binding domain 196 247 IPR001005 -
Lja2g0813 376 Gene3D - 194 251 - -
Lja2g0813 376 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 375 - -
Lja2g0813 376 MobiDBLite consensus disorder prediction 150 174 - -
Lja2g0813 376 MobiDBLite consensus disorder prediction 316 364 - -
Lja2g0813 376 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 195 248 IPR006447 GO:0003677
Lja2g0813 376 SUPERFAMILY Homeodomain-like 192 248 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0813 Lja-Chr2 7510072 7515199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0813 1 375 G2-like Transcription Factor Family AT4G17695 38.287 1.14e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lja2g0813 Myb_DNA-binding 1.8e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0813 - - aprc:113868756 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0813 2 7510072 7515199 Lja2g0813 2 7510072 7515199 ECH