Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0801 ATGGCACCGTCAAAGGGAGAAGAAGAAGCTTTGCGCCTCAAGGGTTTAGCAGAATCCAAGCTCCAAACCTCAAACAACCCCAAATCAGCTCTCAAATACGCCAAGCGGGCCCAGCGTCTCTTCCCTGAACTCGAAGGCATATCGGAGATGGTAACCTCTCTCACCATCCTCTCCGCCACCGATTGGTACACAGTCCTCGGCGTAGAGCCTTTCGCCAATTCCAACGCCGTTCGGAAGCAGTACAAGAAGCTCTCCCTGCTCCTTCACCCCGACAAGAACAACACCCACGTGGCGGCGGCCTCTGAAGAAGCCTTCAAGCTCGTCGGCGAGGCATTCCGCGTGCTCTCTGACAGTGCACTCAAGAAGGGCTATGATGCTGAGCTTCGGAAGAAGGAGGCTCCGACTTTCTGGACCGCGTGCTCCGCTTGCAGGCTGTTGCACCAGTTTGAGAGGAGGTATGTGGGTCATAGCCTTGTGTGTCCTAATTGTAACAAGAGTTTTGAGGCTGTGGAAGCGGTTCTGAGTGATGGGTCTTCTGATGAGGGTGAGAAGGTGGGGGTGAGGAGGAATGAGAAGAGGGAGGTGGTGCTTGGGGTTGCGGCACCGAATGGGGTGAAAGGGAAAGTGGGTGGTGAAAAGGGCTTGAAGGGTAAAGTTGGAGATGGTGATGGTGTGGGAGATGTTGGTGGTGGTGGTTCGAAGAAGAGAATGCGTTCGGTTGGGGATGTGTTTGAGAGGTCAAAGCCTAAGGGGATTATAACTGGGGAGGAAACGATGACATTGGCTGAGTTTCAGTCTCAAGTGAAGAGGAAGGTACAGCAAGAGAAGGTGAAGGATAAGGAGGAGGAATGGGGCAGAACTGATAAGAGGAGCTCGAGGAAGAGAGTGGAAAATAAGAGGGGTTTAGAGATTGGTGAAGTGAGGACTTTGAAGCTTCCAATCAAGGAGAATGCTGTGAAGAGCAAGAGGGGTTCAGAGGTTGGGGAAGAGAGGAGTTTGAAGAAGAATGTGAAGCTGGCAATCAAGGAAAAGCCTGAGGCTTCTGGGAAGAGAAAGAGATTGGAGCTTGAGGAGTGTGGGGATGCTAATGGAGGAGAGTTGGAGGTTATGGCTGTAGTGGATTCGGATTTTTATGATTTTGACAAAGATAGAGTGGAGAGGAGCTTTAAGAAAGGCCAAGTGTGGGCGGCGTATGATGATGATGATGGAATGCCCAGGCATTATGCCTTGATTGATGAAACTGTTTCAGCAAATCCTTTTGAAGTGAGGATAAGTTGGTTGGATCTACAGAGTAATGCGGATGGAAAGATAGTCAGCAGGGAGAAAATGGGGTTTCACATACCTTGTGGCAGATTTAAAGTTGCCAGGAAGGATTCCATTAATTCAGTAAATATCTTTTCTCATGTTGTAGACTGTGACCGGGTAGCACGTGAGGTTTATAAAATTTATCCCAGGAAGGGCTCTGTATGGGCACTATACGGTGAGGCAACTCTTGATGCAGATGGAAGACATTTTGCAGATGAGGGCAAGAGATGCAATGACATTGTTGTATTTTTGACAAATTACAATGAGATGAATGGTCTGAGCATGGCATATCTTGAGAAGGTTGATGGTTACAAGACAGTTTTTAAGAGACAAGATACGGGGAGTCATGCCATTAGATTTCTTGGTAAGGACAACATGTGGTTAATTTCTCATCAGATTCCCGCACGGAAATCTCCTTGCATTGATGAGACTCCTGAACTCTTGGAAGACTGTTGGGAACTTGATCCTGCTTCACTTCCTTCATATTTACTTACTATCGGTGGCATAGATAATTGA 1821 0.48 MAPSKGEEEALRLKGLAESKLQTSNNPKSALKYAKRAQRLFPELEGISEMVTSLTILSATDWYTVLGVEPFANSNAVRKQYKKLSLLLHPDKNNTHVAAASEEAFKLVGEAFRVLSDSALKKGYDAELRKKEAPTFWTACSACRLLHQFERRYVGHSLVCPNCNKSFEAVEAVLSDGSSDEGEKVGVRRNEKREVVLGVAAPNGVKGKVGGEKGLKGKVGDGDGVGDVGGGGSKKRMRSVGDVFERSKPKGIITGEETMTLAEFQSQVKRKVQQEKVKDKEEEWGRTDKRSSRKRVENKRGLEIGEVRTLKLPIKENAVKSKRGSEVGEERSLKKNVKLAIKEKPEASGKRKRLELEECGDANGGELEVMAVVDSDFYDFDKDRVERSFKKGQVWAAYDDDDGMPRHYALIDETVSANPFEVRISWLDLQSNADGKIVSREKMGFHIPCGRFKVARKDSINSVNIFSHVVDCDRVAREVYKIYPRKGSVWALYGEATLDADGRHFADEGKRCNDIVVFLTNYNEMNGLSMAYLEKVDGYKTVFKRQDTGSHAIRFLGKDNMWLISHQIPARKSPCIDETPELLEDCWELDPASLPSYLLTIGGIDN* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0801 606 CDD DnaJ 61 117 IPR001623 -
Lja2g0801 606 PRINTS DnaJ domain signature 81 96 IPR001623 -
Lja2g0801 606 PRINTS DnaJ domain signature 100 120 IPR001623 -
Lja2g0801 606 PRINTS DnaJ domain signature 63 81 IPR001623 -
Lja2g0801 606 MobiDBLite consensus disorder prediction 1 15 - -
Lja2g0801 606 PANTHER BNAC03G44070D PROTEIN 6 602 - -
Lja2g0801 606 MobiDBLite consensus disorder prediction 1 23 - -
Lja2g0801 606 Pfam DnaJ domain 61 125 IPR001623 -
Lja2g0801 606 ProSiteProfiles dnaJ domain profile. 61 128 IPR001623 -
Lja2g0801 606 Pfam Domain of unknown function (DUF3444) 369 572 IPR024593 -
Lja2g0801 606 SMART dnaj_3 60 120 IPR001623 -
Lja2g0801 606 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 6 602 - -
Lja2g0801 606 SUPERFAMILY Chaperone J-domain 52 128 IPR036869 -
Lja2g0801 606 Gene3D DnaJ domain 52 140 IPR036869 -
Lja2g0801 606 MobiDBLite consensus disorder prediction 208 239 - -
Lja2g0801 606 MobiDBLite consensus disorder prediction 276 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0801 Lja-Chr2 7360778 7362796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0801 9 170 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.795 2.74e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0801 - - lja:Lj2g3v1510610.1 1144.8