Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0800 ATGGGCAGCAGTGAGATGGATAAAACCCCTAAAGAGAAGGAATCAAAGACACCACCACTTACTCCACAGGAGCAGCCTCCGACCACCAGCACTGGAACAGTTAATCCTCCTGACTGGTCCAGCTTTCAGGCGTATTCTCCCATGCCTCCACATGGATTCTTGGCATCAAATCCCCAAGCTCACCCTTATATGTGGGGTGTCCAGCATATTATGCCTCCCTATGGTACTCCACCACATCCTTATGTTGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCCATTCCGCCGGGGTCCTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCAAACGGTATTGTCGAGGCTTCAGGAAATACTCCTGGCAGCATGGAAGCTGATGGTAAGCCTCCTGAGGTGAAAGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACACGGAAAAATAATGAACATGGTAAAACACCAGGGACGTCAGCTAATGGAGCTCATTCAAAAAGTGGTGAGAGCGGAAGTGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTCAGAATGACTCTGAATTGAAATCAGGGGGCAGACGGGATTCTTTTGAAGATGAACCATCTCAAAATGGTACTGCAGTGCATACTACACAAAATGGGGGACTTAATACACCTCATCAAACTATGTCTATGGTGCCTATCTCTGCGGGTGGTGCTCCTGGAGCTGTTCCTGGTCCCGCTACAAACTTAAATATAGGAATGGATTATTGGGGCACACCAACTTCATCCAACATTCCTGCACTGCATGGAAATGTTCCATCTACTGCAGTTGCTGGAGGGATGGCTACTGGGGGATCACGGGATGGTGTTCAGTCACAACATTGGCTACAGGATGAAAGAGAGCTCAAAAGACAAAGGCGGAAACAGTCTAACAGGGAGTCTGCTCGCAGATCCAGGTTGCGCAAGCAGGCTGAGTGTGATGAGCTAGCTCAGCGTGCTGAAGCTTTGAAAGAAGAAAATGCTTCACTCCGATCAGAAGTAAGTCGTATCAGGAGTGATTATGAGCAGCTACTTACTGAGAATGCAGCTCTCAAGGAGAGACTTGGGGAACTACCTGGGAACGATGATCTTAGGTCTGGCAAGAGTGATCAGCACACGCATGACGACGCCCAACAGAGTGGGCAGACAGAGGCTGTGCAGGGTGGTCATTAG 1221 0.4775 MGSSEMDKTPKEKESKTPPLTPQEQPPTTSTGTVNPPDWSSFQAYSPMPPHGFLASNPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSIPPGSYPFSPFAMPSPNGIVEASGNTPGSMEADGKPPEVKEKLPIKRSKGSLGSLNMITRKNNEHGKTPGTSANGAHSKSGESGSEGTSEGSDANSQNDSELKSGGRRDSFEDEPSQNGTAVHTTQNGGLNTPHQTMSMVPISAGGAPGAVPGPATNLNIGMDYWGTPTSSNIPALHGNVPSTAVAGGMATGGSRDGVQSQHWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSDYEQLLTENAALKERLGELPGNDDLRSGKSDQHTHDDAQQSGQTEAVQGGH* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0800 406 MobiDBLite consensus disorder prediction 257 273 - -
Lja2g0800 406 MobiDBLite consensus disorder prediction 210 234 - -
Lja2g0800 406 Gene3D - 305 362 - -
Lja2g0800 406 MobiDBLite consensus disorder prediction 1 43 - -
Lja2g0800 406 SUPERFAMILY Leucine zipper domain 305 361 IPR046347 GO:0003700|GO:0006355
Lja2g0800 406 MobiDBLite consensus disorder prediction 296 311 - -
Lja2g0800 406 MobiDBLite consensus disorder prediction 1 18 - -
Lja2g0800 406 CDD bZIP_plant_GBF1 307 357 IPR045314 GO:0003700|GO:0006355
Lja2g0800 406 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 406 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lja2g0800 406 MobiDBLite consensus disorder prediction 26 42 - -
Lja2g0800 406 MobiDBLite consensus disorder prediction 372 393 - -
Lja2g0800 406 Pfam Disordered region downstream of MFMR 136 269 - -
Lja2g0800 406 Coils Coil 322 370 - -
Lja2g0800 406 MobiDBLite consensus disorder prediction 368 406 - -
Lja2g0800 406 Pfam bZIP transcription factor 302 364 IPR004827 GO:0003700|GO:0006355
Lja2g0800 406 MobiDBLite consensus disorder prediction 147 196 - -
Lja2g0800 406 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Lja2g0800 406 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 304 367 IPR004827 GO:0003700|GO:0006355
Lja2g0800 406 MobiDBLite consensus disorder prediction 116 328 - -
Lja2g0800 406 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 309 324 IPR004827 GO:0003700|GO:0006355
Lja2g0800 406 SMART brlzneu 302 366 IPR004827 GO:0003700|GO:0006355
Lja2g0800 406 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0800 Lja-Chr2 7350799 7359162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0800 1 400 bZIP Transcription Factor Family AT2G35530 61.314 4.03e-162 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja2g0800 MFMR_assoc 4.7e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0800 K09060 - gmx:100101882 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0800 2 7350799 7359162 Lja2g0800 2 7350799 7359162 ECH