Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0777 ATGGACTGGTTTAAGAGACAAAGCCAATTTTTCACTTTTTCTCTCATCATTTTCCTTGTACTCCCAACTTTAATTGTGGCTGAATGCACATGTGACCCTGAAGATCAAGAAGAAAGGGACAAAACAAAAGCTCTTAGATACAAGATAGCAGCTTTAGTATCAATACTAGTAGCCAGTGCAATTGGTGTTTCCATTCCACTACTTGGCAAAGCGATACCTTCTCTAAGTCCAGAGAAAGATATCTTCTTTATCATTAAGGCTTTTGCAGCAGGTGTGATATTGTCCACGGGTTTCATTCACGTGCTTCCTGATGCCTTTGAGAACCTCACTTCACCCCGTCTGAATGAGCATCCGTGGGGCGATTTTCCGTTCACCGGATTCGTGGCTATGTGCACCGCTATGGGAACACTCATGATTGAGACTTATGCTACTGCTTATTTCCAGAATCAACAAGTAAAGGGAGCTTTGGTTGAGGCTACTGATGTGGAAAATGAATCAGGACATGAAGGGCATGTGCATCCTCACACTCACCCAACACATGTTCATGCACATGGCCATGTTTCTACAAACCAGTCTACTGAACTTCTTCGCAATAGGGTGGTATCACAGGTGTTGGAACTGGGAATTGTTGTTCATTCTGTTATCATAGGGATTTCTTTGGGAGCCTCCGAGACTCCAAAAACAATAAAACCCCTTGTAGCTGCTTTGACTTTTCATCAATTCTTTGAGGGTATGGGGCTTGGAAGTTGTATAACTCAGGCAAAATTCGAAAGGATGTCTGTTACAATCATGGGATTGTTCTTTGCTTTAACTACTCCTGTGGGGATTGCAATTGGCCTAGTCATCACTAATGGTTATGATGAGAATAGTCCAACTGCCCTTATTGTTGAAGGAATCTTCAATGCAGCTTCAGCTGGGATATTAATCTATATGGCACTTGTAGATCTTCTTGCTGTTGATTTCATGAGTCCAAGGATGCAAAAAAGTGGTAGGCTTCGATTAGGGTCCAATTTATCTCTTTTGCTAGGAGCGGGTAGCATGTCTCTTATTGCCAAATGGGCTTAG 1065 0.4235 MDWFKRQSQFFTFSLIIFLVLPTLIVAECTCDPEDQEERDKTKALRYKIAALVSILVASAIGVSIPLLGKAIPSLSPEKDIFFIIKAFAAGVILSTGFIHVLPDAFENLTSPRLNEHPWGDFPFTGFVAMCTAMGTLMIETYATAYFQNQQVKGALVEATDVENESGHEGHVHPHTHPTHVHAHGHVSTNQSTELLRNRVVSQVLELGIVVHSVIIGISLGASETPKTIKPLVAALTFHQFFEGMGLGSCITQAKFERMSVTIMGLFFALTTPVGIAIGLVITNGYDENSPTALIVEGIFNAASAGILIYMALVDLLAVDFMSPRMQKSGRLRLGSNLSLLLGAGSMSLIAKWA* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0777 354 MobiDBLite consensus disorder prediction 166 188 - -
Lja2g0777 354 PANTHER ZINC/IRON TRANSPORTER 18 354 - -
Lja2g0777 354 TIGRFAM zip: ZIP zinc/iron transport family 32 354 IPR004698 GO:0005385|GO:0016021|GO:0071577
Lja2g0777 354 Pfam ZIP Zinc transporter 47 351 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lja2g0777 354 PANTHER ZINC TRANSPORTER 1 18 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0777 Lja-Chr2 7070398 7072251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0777 27 354 Inorganic Solute Cotransporters AT3G12750 57.485 1.49e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0777 K14709 - gmx:547695 502.286