Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0773 ATGGCGGCAAACGTGAACTACGACGCCATGCCCCAAAACACTACCACTCACCCTCATTGGTACTCACCAAATTCCGGAATTTACCACAGCAAACACGCTTCCATGGAACTTCCCACCGACCCTTTTGTCGACGTTGTTTCCTTCATTTTCTCTCACCGTCATGATGGGGTTTCAGCCCTCGTTGATTCCTCATCTGGGTCTTCTATTTCTTACTCAAACTTGTTACCTTTGGTCAAATCCATGGCTTCTGGTTTGCACAAGTTGGGTGTTTCACAAGGTGATGTGGTTTTGCTTCTGCTTCCAAATTCCATTTACTATCCCATTGTGTTCTTGGGTGTTCTCTATCTAGGTGCTGTTGTTACACCATTGAACCCTCTCAGTAGTATCTATGAGATACGTAAGCAGATTACTGAGTGTGGTGTGAGTTTTGCTTTTACTGTACCTGAAATTTTCAATAAACTAGAACCATTAGGCATTCCCATTGTTGCTGTGCCAGAGAATGAGAAGGGTTTGAAGCTTGGTTGTTTCTCAGGGTTTTGTAGCCTGGTTTCTGGCAATTTTGATTTGCCTCGGAGGCCGGTTATTAAGCAGGAAGACACTGCAGGTATATTGTATTCTTCTGGGACTACAGGGGTGAGCAAAGGAGTTGTTCTGACCCATAAAAATCTTATTGCTATGGTTGAGCTATTTGTGAGGTTTGAAGCTTCTCAATATGAATACTCTTGCTTGAATAATGTGTTTCTAGCTGTTTTGCCCATGTTTCATATATATGGTTTATCGCTCTTCGGTATGGGATTACTGTCTTTGGGTTGTACGGTTGTTGTGATGAGGAAATTCGACATTGATGAGGTTATCGCGGTGATTGATAAATATAAAGTTACACACTTTCCTGTTGTTCCGCCGATGTTGACAGCATTGACAACAAAGGCTAAGGGTGTTAATGGAAGTAAGCTGCAGAGTTTGATACAGGTCTCCAGTGGTGCAGCGCCTTTGAATGCAGCGGTTATTGATGACTTTGTACAAACTTTCCCTAATATTGATTTTATACAGGGTTATGGAATGACCGAGTCGACTGCAGTAGGGACACGTGGCTTCAATAGCGAAAAGTCTCGGACCCATTCTTCAATAGGGTTGTTAGCTCCAAACATGGAGGCAAAAGTGGTAGACTGGATTAGTGGTGCATTTTTTCCCCCTGGTAGCAGTGGTGAGCTTTGGTTGAGAGGACCTTCAATTATGAGAGGATACTTGAATAATGAGGAAGCCACAAGTTCAACAATAGATAAAGATGGTTGGCTACATACTGGAGATGTTGTTTATTTTGATCAGGATGGGTATTTACATATATCTGACCGCTTGAAAGATATAATCAAATACAAGGGCTTTCAGATTGCTCCTGCTGATTTAGAAGCTGTATTAATTTTGCATCCTGAAATAGTTGATGTTGCTGTTACAGCTGCCATGGATGAAGAAACTGGGGAGATACCAGTGGCATTTGTGGTCAAGAAGGTTGGAAGTGTGCTTTCTCCAAAGCATATTATGGATTATGTTGCTGAGCAGGTTGCTCCATACAAGAAGGTTAGGAAAGTGATCTTCACTGACAAGATACCAAGGTCTCCCACAGGGAAGATCCTTCGGAAGCAACTGAGGAATTGCTTCACTTCTAAACTCTAG 1671 0.4243 MAANVNYDAMPQNTTTHPHWYSPNSGIYHSKHASMELPTDPFVDVVSFIFSHRHDGVSALVDSSSGSSISYSNLLPLVKSMASGLHKLGVSQGDVVLLLLPNSIYYPIVFLGVLYLGAVVTPLNPLSSIYEIRKQITECGVSFAFTVPEIFNKLEPLGIPIVAVPENEKGLKLGCFSGFCSLVSGNFDLPRRPVIKQEDTAGILYSSGTTGVSKGVVLTHKNLIAMVELFVRFEASQYEYSCLNNVFLAVLPMFHIYGLSLFGMGLLSLGCTVVVMRKFDIDEVIAVIDKYKVTHFPVVPPMLTALTTKAKGVNGSKLQSLIQVSSGAAPLNAAVIDDFVQTFPNIDFIQGYGMTESTAVGTRGFNSEKSRTHSSIGLLAPNMEAKVVDWISGAFFPPGSSGELWLRGPSIMRGYLNNEEATSSTIDKDGWLHTGDVVYFDQDGYLHISDRLKDIIKYKGFQIAPADLEAVLILHPEIVDVAVTAAMDEETGEIPVAFVVKKVGSVLSPKHIMDYVAEQVAPYKKVRKVIFTDKIPRSPTGKILRKQLRNCFTSKL* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0773 556 Pfam AMP-binding enzyme C-terminal domain 468 542 IPR025110 -
Lja2g0773 556 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 14 555 - -
Lja2g0773 556 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 555 - -
Lja2g0773 556 CDD 4CL 37 548 - -
Lja2g0773 556 Pfam AMP-binding enzyme 54 458 IPR000873 -
Lja2g0773 556 SUPERFAMILY Acetyl-CoA synthetase-like 52 554 - -
Lja2g0773 556 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
Lja2g0773 556 Gene3D - 454 554 IPR045851 -
Lja2g0773 556 Gene3D - 26 453 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0773 Lja-Chr2 7032188 7036050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0773 11 556 Monolignol Biosynthesis Gene Families AT4G19010 60.073 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0773 K01904 - gmx:100804808 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0773 2 7032188 7036050 Lja2g0773 2 7032188 7036050 ECH