Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0766 ATGGAGAGTGGTGGTGGCAGAGAAGGTTATGATGGGGTGGTGATGATGATGACAAGAGACCCAAAGCCGAGGCTGAGGTGGACTGCTGATCTTCACGACCGGTTCGTCGATGCTGTCACAAAGCTTGGTGGCCCCGAGAAGGCGACTCCCAAGTCTGTTCTGAGGTTAATGGGCTTGAAAGGCTTGACATTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAGCAGGCTAGAAAGCAAAGTGACGAACACTACAAAGAAAATAATAGATGTTCATATGTAAATTTCAGTCATCGTTCTTCAGGGCCTAATACCAGTTACAGTTACAGAGGTGATAAGGAAGATAATGAAGGGGGAGAAATCCCAATAGCAGAAGCACTGAGATGTCAGATTGAAGTTCAAAAGAGATTGGAAGAGCAGCTTGAGGTACAGAAGAAATTGCAGATGAGAATAGAGGCCCAAGGGAAGTATTTGCAAGCTGCATTAGAGAAAGCCCAGAGGAGCATCTCCCTGGATGGATCAGGCACTCTTGAAGCATCAAGAGCTCAGTTGTCTGAATTCAACTTTGCTTTGTCAAATTTCATGGAAAATATGAATAGAGACAGTAAAGATGACATAATGGACATGAATGATTTTTATAATAAGAGTCATAGCTCAGCTTTCCATTATCAAGGAGGAGAGAGAGAAGATTATGAGGATCAAAAGCCTAAGATTGAGGGGGAGTTTGACTTAAACATTAAAGGTAGCAACAATGAAATGGTATCTGCAGATGGAGCTGAAATGGAATCCAAGATGCTTTCATATAGGGTATACAATTTTTGA 831 0.4188 MESGGGREGYDGVVMMMTRDPKPRLRWTADLHDRFVDAVTKLGGPEKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQSDEHYKENNRCSYVNFSHRSSGPNTSYSYRGDKEDNEGGEIPIAEALRCQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQAALEKAQRSISLDGSGTLEASRAQLSEFNFALSNFMENMNRDSKDDIMDMNDFYNKSHSSAFHYQGGEREDYEDQKPKIEGEFDLNIKGSNNEMVSADGAEMESKMLSYRVYNF* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0766 276 Pfam Myb-like DNA-binding domain 25 75 IPR001005 -
Lja2g0766 276 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 11 256 - -
Lja2g0766 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 79 IPR017930 -
Lja2g0766 276 Gene3D - 21 79 - -
Lja2g0766 276 SUPERFAMILY Homeodomain-like 22 79 IPR009057 -
Lja2g0766 276 Coils Coil 127 157 - -
Lja2g0766 276 Pfam MYB-CC type transfactor, LHEQLE motif 125 170 IPR025756 -
Lja2g0766 276 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 11 256 IPR044848 GO:0003700
Lja2g0766 276 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 77 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0766 Lja-Chr2 6979112 6982971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0766 13 196 G2-like Transcription Factor Family AT3G24120 54.497 3.20e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lja2g0766 Myb_DNA-binding 3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0766 - - lja:Lj2g3v1536360.1 495.738