Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0763 ATGGATGTTTCTTCTGTGGTTGTGGGAGGTGGGGATACTGCTGTTCCTGCAGAAGGTGCGGCCTCGGCAGGTGAAAGTAATGGTGGGACTGCTGCTCCAAAGAAAACTTTGTTAATGCCCCTACTTTGGGAGACAATTGATCATGTAACAGAAGGGAGTTTTTGGGATGATTCACGTCCCAATGCATTTAGGCTTCCTGATTTAGATATATCAGAACTTGAGATCCTGTTTTCAGTAGCGGCCGCTTCTGATTGGAGCAGTACTAAAGGTGGAGGTCGGCATGGTTCTTATATTAACAAACCTGAGAAAATACGATTGATGGGTAGAGCATATAACCGTGAAATAATGCTCTCTACTATAAAAAAAACTTTGCCAGATATGATTAAGGCAATTCTGGCATTGGATTCTTCTGTTCTGGATATTGATCAAGTTGAGAATCTTATCAAACTCTATCCCACTAAGGAAGAGATTGAGATGTTGAAGAATTATACAGGGGACAAGGAAATGCTCGGAAAGTGTGAGCAGTTTTTTATGGAGCTCATAAAGGTTCCACGAATAGAATCCAAGTTATGGGTGTATGCTTTCAAAATCAACTTTTTTAAGAAGGTGAGCGATTTAGAGGAAAATTTGAAAATAGCCAATGGTGCAGTCAGAGAGGTGAAAGCTTCTGTGAAATTGGCTGAGATAATGCTGACTATGCTTACTTTGGATAATGGCTTTGCCTTGAATCAGGGAACATCACAGGGATCAGCAATAGATTTCAAGTTGGAGATCCTTCTTAAATTTTCTGATAATCGCGCAAGAAATGACAAAAGGACCTTGATGCATGATTTGTGTCAGCTCCTTGCTGAGAAAAAGCCAGAATTGCTAGATTTCTATAAAGATTTTGTCAAGTTGGAAAAAGCTTCTAAGATCCAACTAAAAGCAGTAGCTGACGGAATGCAAGTTCTATGTGAAGATTTAGAGAAAGTTGACCAAGAACTCCATGCTTCTGAAACGGAATTTTACAAGGTGTTGAAGACTTTTCTGGATGACGCCGAAGCTAAGATGGGGTCACTTGTATCATCGTATACAAATGCGAGAAGATTTGCAGATTCTTTGTCCCGGTACTTTGGGGCGAATCCAGCTACATGCCCATTTGAAAAAGTGACACAAATACTTGTTACCTTTGTCAAGATGTTCAAGAAGACAAGGGAGGAGAACAAAAAACAAGGAGATGCTGAAAAGGAGAATTTACATGCTGAAAGAGGGAATTTAAGAGTCCATGAAGGACAAGATATTATGTGTGTCCAATAA 1296 0.3997 MDVSSVVVGGGDTAVPAEGAASAGESNGGTAAPKKTLLMPLLWETIDHVTEGSFWDDSRPNAFRLPDLDISELEILFSVAAASDWSSTKGGGRHGSYINKPEKIRLMGRAYNREIMLSTIKKTLPDMIKAILALDSSVLDIDQVENLIKLYPTKEEIEMLKNYTGDKEMLGKCEQFFMELIKVPRIESKLWVYAFKINFFKKVSDLEENLKIANGAVREVKASVKLAEIMLTMLTLDNGFALNQGTSQGSAIDFKLEILLKFSDNRARNDKRTLMHDLCQLLAEKKPELLDFYKDFVKLEKASKIQLKAVADGMQVLCEDLEKVDQELHASETEFYKVLKTFLDDAEAKMGSLVSSYTNARRFADSLSRYFGANPATCPFEKVTQILVTFVKMFKKTREENKKQGDAEKENLHAERGNLRVHEGQDIMCVQ* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0763 431 SMART it6_source 28 429 IPR015425 -
Lja2g0763 431 Gene3D Formin, FH2 domain 29 405 IPR042201 -
Lja2g0763 431 MobiDBLite consensus disorder prediction 1 31 - -
Lja2g0763 431 Pfam Formin Homology 2 Domain 31 395 IPR015425 -
Lja2g0763 431 Coils Coil 203 223 - -
Lja2g0763 431 SUPERFAMILY Formin homology 2 domain (FH2 domain) 108 410 - -
Lja2g0763 431 PANTHER FORMIN-J 18 415 - -
Lja2g0763 431 Coils Coil 314 334 - -
Lja2g0763 431 ProSiteProfiles Formin homology-2 (FH2) domain profile. 28 420 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0763 Lja-Chr2 6956434 6966294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0763 30 404 FH2 protein (formin) Gene Family AT1G31810 59.481 1.07e-138 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0763 - - lja:Lj6g3v1603990.1 809.675