Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0753 ATGTTTCCATGCATTGGTTGTGCGAAGCAGACATCTGATGATCATGATGAGAGGGATGAAGGATCTCGTCGTCAGAGTAACACCCCACTGCAGAGGCAAGATTCTGCCAGAAGCATCACTACCCAGGCCCCTCCTAGAGGTCATGAATCTGTGGTGGCAGCTCCTGATGTGGCGGTGGAGCAAGAGGATGATGACAGAAAGTGGGTGTCGCATGCTGAGCCAGGAGTTATCATTAACTTTGACCCAAATATATTCACTAGGTTGGATGCTGCGCAATGGTGGTATGATAATTATGACACAGTCATTGAAGTTTATGACGTCAAGAAGATCAACCAGATTGTTGTTCCTCCTAGGATTGAGGATCACTCAGGGGATATTTCTTTCCCAATTCATTCATCTGAGACAGACAGCCCTGTGGCGGAATGGCTGAACAACCATGTAGCACCAGGGCATGGGATTGATCAGCATCCTTCTGGAGGTGCAGCGGCCAATGTCTTGGACCCAGAGTGGATAATGCAGGATCGTGAAGGAGTGTTCATCACAATCAAGGCCAAACCTGATGGGACTAAAGAGCTTCGTCGTGTCAAATTCAGCCGCGAGGTGTTTAATGAGGATGAAGCAAAGACATGGTGGGAGGAGAACAAGGAAAGAGTCAATGCTCAGTATCTGTGA 672 0.4807 MFPCIGCAKQTSDDHDERDEGSRRQSNTPLQRQDSARSITTQAPPRGHESVVAAPDVAVEQEDDDRKWVSHAEPGVIINFDPNIFTRLDAAQWWYDNYDTVIEVYDVKKINQIVVPPRIEDHSGDISFPIHSSETDSPVAEWLNNHVAPGHGIDQHPSGGAAANVLDPEWIMQDREGVFITIKAKPDGTKELRRVKFSREVFNEDEAKTWWEENKERVNAQYL* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0753 223 MobiDBLite consensus disorder prediction 10 25 - -
Lja2g0753 223 Pfam Transcription factor regulating root and shoot growth via Pin3 168 222 IPR013591 -
Lja2g0753 223 MobiDBLite consensus disorder prediction 1 51 - -
Lja2g0753 223 ProSiteProfiles BRX domain profile. 168 223 IPR013591 -
Lja2g0753 223 PANTHER PROTEIN BREVIS RADIX-LIKE 1 58 223 - -
Lja2g0753 223 MobiDBLite consensus disorder prediction 26 45 - -
Lja2g0753 223 PANTHER PROTEIN BREVIS RADIX-LIKE 1 58 223 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0753 Lja-Chr2 6869115 6871439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0753 49 223 Major Intrinsic Protein MIP AT1G31880 32.000 1.96e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0753 - - jre:109014251 144.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0753 2 6869115 6871439 Lja2g0753 2 6869115 6871439 ECH