Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0752 ATGATATCTGAAAGTGCTGCTTTGTATTCCAAGGGCGCAATGGAGAGGTACACGATAATTAAGGAAGTTGGTGATGGAACGTTTGGGACTGTCTGGAGAGCTATAAATAAGCAAACTGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTACGAAAAATGAACCACCCAAATATTGTTAAGCTGAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTATATGGAATGCAACCTTTACCATCTTATGAAAGATAGGGAAAAGCTGTTCTCTGAAGGTGAAATTAGAAATTGGTGTTTTCAGGTTTTCCAAGGTCTTGCTTACATGCACCAGCGTGGATACTTCCATCGCGACATGAAACCTGAAAACTTGCTGGTTACCAAGGATATTATAAAAATTGCCGATTTTGGCCTAGCCCGAGAGATCAGCTCACAACCACCCTACACTGAGTATGTCTCCACACGATGGTATCGTGCTCCTGAAGTGCTGCTTCAGTCTCATCTATATAACTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAGCTGTTATCTCTCCGTCCTCTGTTCCCAGGAGTCAGTGAAGCGGATGAGATTTACAAAATATGTGGTGTGATAGGCAGTCCAACCATTGAATCATGGGCTGATGGACTGAGACTTGCAAGGGCTATTAACTATCAGTTTCCACAGCTTGCTGGTGTACATCTTTCTGCATTGATCCCATCTGCAAGTGATGATGCAATTAGCCTAATCACATCACTTTGCTCCTGGGATCCCTGCAAGAGGCCAACAGCTTCAGAGGCCCTTCAACATCCTTTCTTCCAGAGTTGCTTTTACATTCCTCCATCCCTTCGCACCAGAGCAGTAGCGAGAACTCCTCCACCTGCTGCAACTAGAGGGGCACTGGATCAGCAGGGGGCTAAGAGATACTCCGGTGTTTTGCCTAATTCAAAGCTGACCAATAATTTTTCTTCTCTGAAAGTGCATCCTTCCTTAGTTTCAGGTGTCCAACGGAAGCTGGATATGGTAAATCAGGATGGAATGAAGAAAGAGAATTCGATGAAGACTTCGATACAGTCAAAATATCGACAGCCAGGGAAGGACAGTCCAACTTCTATGATCAAAGGGAGGGGGGTTTCCGAGACTACCGAGAGGTTGGCCAATATGTCTGTTGGTACTCGGAGACAGTCCATGGGGCAATCCCGTCCTCCAATGAAGGCTGGAGGAGTCAATTGGATTTCTGAATCTGGAAACTTCATGCTCAGGCCCGCACAACAGATTCCAACTGGAAGAACCTTCACAAGAAAAGTTGCCGGATGA 1386 0.4466 MISESAALYSKGAMERYTIIKEVGDGTFGTVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYHLMKDREKLFSEGEIRNWCFQVFQGLAYMHQRGYFHRDMKPENLLVTKDIIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSHLYNSKVDMWAMGAIMAELLSLRPLFPGVSEADEIYKICGVIGSPTIESWADGLRLARAINYQFPQLAGVHLSALIPSASDDAISLITSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRTRAVARTPPPAATRGALDQQGAKRYSGVLPNSKLTNNFSSLKVHPSLVSGVQRKLDMVNQDGMKKENSMKTSIQSKYRQPGKDSPTSMIKGRGVSETTERLANMSVGTRRQSMGQSRPPMKAGGVNWISESGNFMLRPAQQIPTGRTFTRKVAG* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0752 461 Pfam Protein kinase domain 17 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0752 461 Gene3D Phosphorylase Kinase; domain 1 7 95 - -
Lja2g0752 461 CDD STKc_MAK_like 17 296 - -
Lja2g0752 461 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 14 406 - -
Lja2g0752 461 Gene3D Transferase(Phosphotransferase) domain 1 96 301 - -
Lja2g0752 461 SMART serkin_6 17 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0752 461 MobiDBLite consensus disorder prediction 372 389 - -
Lja2g0752 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Lja2g0752 461 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 406 - -
Lja2g0752 461 MobiDBLite consensus disorder prediction 372 397 - -
Lja2g0752 461 SUPERFAMILY Protein kinase-like (PK-like) 12 300 IPR011009 -
Lja2g0752 461 ProSiteProfiles Protein kinase domain profile. 17 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0752 461 ProSitePatterns Protein kinases ATP-binding region signature. 23 47 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0752 Lja-Chr2 6853896 6858353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0752 14 299 Core Cell Cycle Gene Families AT1G66750 39.175 1.55e-68 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Lja2g0752 Pkinase 3.5e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0752 K08829 - gmx:100810150 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0752 2 6853896 6858353 Lja2g0752 2 6853896 6858353 ECH