Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0745 ATGGCTGTTGTGAATTTGACAGAAGGGGCGATAACCAGTATGTGCACTGACAATTTCACTTCCGAGCAATTGCCTGTGCTGCAAGTTATCGACTTGAAGCAGATACAGGGGAACAGATCCCTCAGGAGGTACCGCGTTGTCGTCTCCGACGGTTTCCTCTATCAGCAAGGGATGCTCGCCCCTCACAAGAACGACTTGGTCCATTCTGGAAAGTTGCAAATAGGCTCCATTGTTAAGCTCTTGCTACCATGTTGCAAATCGCATATCTCTGAAGTCATACTTATCAGTCCAGCATCCTACCAAGTTACCACTAGCTTAGTGGCGTTTGTGTTTTCACTTGTGCCATCATCTCCAGCAACTAGGATGGTTGTCATTTGCTTCTTCAGCAGTGCTGTTTGCAATATGGTAGGATTTTGCTCAGGGTCAAGACCAAAGAGCCTATGA 444 0.4685 MAVVNLTEGAITSMCTDNFTSEQLPVLQVIDLKQIQGNRSLRRYRVVVSDGFLYQQGMLAPHKNDLVHSGKLQIGSIVKLLLPCCKSHISEVILISPASYQVTTSLVAFVFSLVPSSPATRMVVICFFSSAVCNMVGFCSGSRPKSL* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0745 147 PANTHER REPLICATION FACTOR A 1, RFA1 4 106 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Lja2g0745 147 PANTHER REPLICATION PROTEIN A SUBUNIT 4 106 - -
Lja2g0745 147 SUPERFAMILY Nucleic acid-binding proteins 4 85 IPR012340 -
Lja2g0745 147 Pfam Replication factor-A protein 1, N-terminal domain 6 81 IPR007199 GO:0003677|GO:0005634|GO:0006260
Lja2g0745 147 Gene3D - 4 126 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0745 Lja-Chr2 6804845 6807534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0745 1 80 Core DNA Replication Machinery Family AT4G19130 48.810 4.71e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0745 K07466 - lja:Lj2g3v1548470.1 110.153