Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0731 ATGGGGTACGATTCAGATAGCCCCTGGCGCAACGGGAGGGAAGAAGACGATGAAGAAGAGTACGAGGAGTCTGACAAGGGTAATCGTTTTCTGGGGTTCATGTTCGGAAATGTTGATAACTCTGGCGATCTTGATGTTGATTATCTTGACGAGGATGCAAAGGAGCATCTTTCTGCATTGGCGGATAAGCTGGGTCCATCACTGACAGATATAGATTTGTCAGGAAAATCACCACAAACACCGCATGATGTTGTTGAACAAGACTGTGGTGAAAAAGCTGAAGATGCAGTTGATTATGAAGATATTGATGAAGAATATGATGGTCCTGAGACTGAAACAGCCAATGAAGAGGACTATTTACTGCCCAAAAAGGATTTTTTCTCTGGTGAAGCTTCCCTTGAAGCTTTGGCGTCTAGATCTTCTGTCTTTGATGATGAAAATTATGATGAAGAATCTGATAAGGAACAAGACTTAGTGACCAACGATTCTAAAGTTGACAGCTCTTTAGCTGGGGAGCAGGAAGAGAATTTTGTTGATGCATCTAAAGGAGACAGGGCTCTAGAGCATGATTTACAAGCTGGCTCACAGCAGACCGAAGAATCGGACACTGATATACAAAAACTTGATGAGGAAGGGCCTGAAGTTTTAAAAAGGTCTATGGCTGCACCGTTGCCTGTTTTGTATGTGGAAGATGGGATGGCAATTTTACGCTTTTCTGAAATCTTTGGTATTAGTGAGCCTCTCAGAAAGGGAGAAAAGAGAGAGCATCGACATTCCATTCCTAGAGATAGATACAAGTCTTTGGATTTATCTGATGATATCGTAGAAGAAGATGAAGAGGAGTTCCTCAAAGGATTCTCTAAGAGTCTCCCACTTACTAAACAGATTTCTGTAGTCCGTAATGATGCATCAGAAAGCAGTGATGTTGACTTAGAATTTCCAAAATTTGGATTTCTTCATGGGGATGCTACAATGGCTGGGAAAGATGATCGGCAACCAAAGGACTCTTGTCTTAGTGCTGAACCATTGAAAGTGGATTTCACAGAAGATCTTCTGTTGAAAGATCATCATCTGACGCGGGCCAACTTTTATCCTCTTGATCAGCGAGACTGGGAAGAGGAAATCCTTTGGGGAAATTCTCCTGTTGCCAGTGATATTAATGTTGAGAGCTGTGAAATTTCTGGACCTGAACTGGGAGTTTCTGGTGATTGTGAAATCGAAATTGAAAGTGGGATCCAGAATCTCCAGTTAGAGCCCCAGCACATGCTGGAAGAGAAAGATCACAATTTCTTCATGTGCTACTCTCCTGTCACATTAGATAGCTTTGGCTCAAGGGATTCTACTGGGGATAAATCCAATTTAATGTCAAAAAGTCTATTTCATCCCCAACTGTTGAGGCTAGAATCCAGATCTGAAGTAGATGGTTCTAGTCTTGCAGATGGAGGGGGGGAAGGTATATCTGAGAAGCGTAATCAAAGTGGTCAATTAAAGCGTTTTACGAAGTTTATGTCACAAAACAGAGACCTGATGGAGGGCTCGTGGTTAGACAAGATAATATGGGAGGAGCAGGGTAGGCCTATGATGAAATCAAAGCTTATATTTGATCTTCAGGATGATAAAATGCACTTTGAAGTTTTGGATAACAAGGATGGTACACATCTTCGCGTTCATGCTGGGGCTATGATTTTAACTCATTCTTTAAAATCAAGCAGTGTAGATTCTTCTGAGCAACCAGGACATGGAGTTCAATATGGATGGCGATATGTTGCTAATGACAAACACTATTCAAACCGGAAAACTTCCCAGCAACTGAAATCGAATTCAAAAAAGCGCTCAGCTCATGGTGTCAAAGTTTTTCACTCACAACCTGCATTGAAGCTTCAGACAATGAAATTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGACCTAAAGCATTGTGGTATCCCCATGACAGTGGAGTGACTGTCAAGGAACAAGGGAAATTGCCAACACACAGACCCATGAAAATTATTATTAAGAGCTTGGGTGGCAAGGGTAGTAAACTGCATGTTGATGCTGAAGAAACTCTTTCTTCTGTTAAAGCTAAAGCTTCCAAAAAGCTAGATTTCAAGGGATCAGAAACAGTGAAATTATACTATTTAGGGAGGGAGCTTGAAGATCACAAATCACTTGCAGCACAAAATGTTAAACCAAACTCCTTGATACATCTTGTCCGTACAAAGATACATTTGTGGCCAAGGGCACAAAGGGTTCCGGGTGAGAATAAGTCGTTGCGTCCTCCTGGGGCATTCAAGAAAAAGTCTGATCTGTCTGTGAAAGATGGACATGTTTTTCTGATGGAGTATTGTGAAGAAAGGCCTTTACTTTTAAGCAATGTGGGAATGGGTGCAAGACTTTGTACATACTATCAAAAATGTTCCCCGGATGACCAATCTGGCTCCTTATTACGCAACACAGACAGTAGCTTGGGGCACATCATTTCTCTTGATCCTGCTGATAAATCTCCTTTCATTGGAGATTTAAAACCTGGTTGCAGTCAGTCATCACTTGAGACAAATATGTACAGAGCACCCATATTTCCTCATAAAGTTCCATTAACTGACTACCTCCTGATTCGTTCAGCAAAGGGAAAACTATCGTTAAGGCGGATCGATAAAATTAATGTTGTTGGTCAGCAGGAGCCTCTCATGGAGGTATTATCACCTGGAAGTAAGAATTTTCAGACTTATATGATGAACAGGCTGCTGGTACAAATGTGCCGTGAATTCCAAGCAGCAGAGAAACGACGCTTGCCTCCATACATTCGTATTGATGAGTTACTGTCACAGTTTCCTTACCTATCAGAAGCGTCATTCCGTAAGAAAATCAAGGAATATGGAAATTTACAGAGGGGAGCCAATGGACAGTCAGTTTTGGTTAAAAAGCGAAATTTCCGCATGTGGTCAGAGGATGAATTGAGAAAAATGGTGACACCAGAGCTTGTTTGTGCCTATGAAAGCATGCAAGCTGGACTCTACCGTCTAAAACATCTAGGGATAACTGAAACACATCCAACTCATATTTCATCCGCAATGAGTCGGCTTCCTGATGAAGCAATAGCATTGGCTGCTGCATCACACATCGAGAGGGAATTGCAGATTACTCCTTGGAACTTGAGTAGCAATTTTGTAGCCTGTACAAGCCAGGGTAAGGAAAATATTGAACGGATGGAAATTACTGGTGTTGGTGATCCATCAGGTCGTGGCATGGGTTTTAGCTATGCTAGGGCACCTCCAAAGGCGCCAGTGTCTAATGCAATGGTGAAGAAGAAAGCAGCAACCCGAGGAGGTTCCACTGTCACTGGTACAGATGCTGATCTACGTAGACTGAGCATGGAAGCTGCTCGAGAGGTTCTTCTTAAGTTCAATGTTCCTGAGGAAATAATTGCTAAACAGACCAGGTGGCATCGCATTGCTATGATTCGCAAACTTTCAAGTGAGCAAGCTGCATCTGGGGTTAAGGTTGATCCAACAACAATCAGCAAGTATGCTCGTGGGCAGCGCATGTCATTTCTTCAGTTACAGCAGCAGACCAGAGAGAAGTGCCAAGAGATTTGGGATCGACAGGCTCAGAGTTTGTCAGCTATAAATGGTGATGAAAATGAGAGTGATTCAGAAGGGAATAGTGATCTAGATTCTTTTGCTGGAGATCTGGAGAATTTACTTGATGCCGAGGAGTGTGAAGAGGGAGATGAGGGCACAAATGACTTAAAACGCGATAAGGGAGATGGTGTTAAGGGTCTTAAAATGAGAAGACACCCAACTTTGGCCCAGGCAGAGGAGGAAATAGAAGATGAAGCAGCTGAGGCCGCTGAGTTACGCAGGTTGCTTATGGATGATGTTGAAGCTGATAGGAAGAAAAAGAAGAAAGCTAGGGTTGTGGTGGATGAAGCAAGATTAATACCAAAGCTGCGACCAAAATTCATCTTTGACAACACTGAACAAGTTAAGCAAATAGCAAATACATTGCAACTAGATGGAGCTAATCATTTTAGAGAGGATTCAATTGCAGAGCTTAGGGAGGAGGAAAATTTTCCTGCTAAAAAAAGCAAAACAATGAAGGCCAATAAAGCGAAAAAGAATGACATCACACCTATTAGTGTACCCAATAAAAAAATCAAACTAAATATGGGAGAAGGAATTAAGAACCAGGTATTCAAGGAGAAAAAACCATCAAGGGAAACTTTTGTTTGTGGAGCATGTGGCCAGCTTGGGCACATGCGGACAAACAAGAACTGTCCAAAATATGGTGAAGATCTAGAAGCACAACTTGAATCTACTGATATCGAAAAATCAGGAAAATCCATCTTTGTTGATCCCTCTAGTCAGTCCCAGCATAAAGCGCCTTCCAGAAGGTCAATATCAAAAAGCTCAACAAAAATTGCTCCTGTTGACAATTCAACAAAAATCCCATTGAAATTCAAATGCAGCTCCACTGAGAAATCTTCTGATAAACCTGCAATAGAAATATTTCAGAGTTCCGACAAGCCAGTCACTTCTGACTCAGAAACTGCCAAGTCTGCTAAGGTCAACAAGATAATTATTCCCAGCAAAGTGAAACCAGATGATACACAGGCTGAGTCTCTTAAGCATGCTATTGTTATACGGCCTCCTGCTGATTCCGGTCGAGGTCTTGCTGATTCTCACAAGTTTCCAATTAAAATACGGTCGTCTACAGAAATTGATAGGGAGCAAAGTCACAAAAAGATCATTATAAAACGTACAAAAGAGGTTGTTGATTTGGAACTGGACAGTCCTGTTGCAAGCGCTGGACTTGAACACAGAAAAACTAAAAGAATTGTTGAATTATCGAATTTTGAGAAGTACAGTAGGCAGGAGACCGTGTATTCAACCGAAGGTTTGGTAAAATGGAAAGGTAATGAGGATAGAAGATGGTGGGAAGAGCAAGAGAAACGGAGAAATGAAGTGAGGCTCAGAGAAGACAGAGCAAGGAGGCATCACAAAGATGAGATCAGGATGCTCAAAGAGCAAGAAAGGTTAGATGAGTTAAAAAGATATGAAGAAGATATTAGAAGAGAGAGGGAGGAGGAAGAACAGCAAAAAGCTAAGAAGAAAAAGAAGAAGAAAAAACATGATTTCCGAGATGATTATTTAGATGACCCCAGATCGAGGAGATATGACAAGAGGATGCTCGAAAGAGACCGGAGTGGAAAGAGGAGATCTGCTGAGTTGGGAAATATTGGTGTAGATATTATGCCACCAACAAAGCGCCGACGAGGGGGAGGGGGAGAGGTTGGTTTGGCAAATATATTGGAGGGCATTGTGGACGTCCTTGTGAAAGATAGGCATGATCTGTCTTATCTTTTCCAGAAACCGGTGTCGAAGAAAGAGGCTCCTGACTACTTTGACATTATAGAGAGGCCAATGGATCTTTCCAGAATCAGGGAGAGGGTACGGAACATGGAATACAAGAGCCGAGAAGATTTCAGACATGATATCTGGCAGATCACTTACAATGCTCATAAATATAACAACGGAAGAAATCCTGGAATTCCTCCCCTTGCAGACAGGCTTTTAGAATATTCTGATTATTTGTTGAATGAGAATGATGATAATCTCACTGCTGCGGAAGCTGGTATCGAAAATAAAGATTTCTAA 5664 0.4175 MGYDSDSPWRNGREEDDEEEYEESDKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPQTPHDVVEQDCGEKAEDAVDYEDIDEEYDGPETETANEEDYLLPKKDFFSGEASLEALASRSSVFDDENYDEESDKEQDLVTNDSKVDSSLAGEQEENFVDASKGDRALEHDLQAGSQQTEESDTDIQKLDEEGPEVLKRSMAAPLPVLYVEDGMAILRFSEIFGISEPLRKGEKREHRHSIPRDRYKSLDLSDDIVEEDEEEFLKGFSKSLPLTKQISVVRNDASESSDVDLEFPKFGFLHGDATMAGKDDRQPKDSCLSAEPLKVDFTEDLLLKDHHLTRANFYPLDQRDWEEEILWGNSPVASDINVESCEISGPELGVSGDCEIEIESGIQNLQLEPQHMLEEKDHNFFMCYSPVTLDSFGSRDSTGDKSNLMSKSLFHPQLLRLESRSEVDGSSLADGGGEGISEKRNQSGQLKRFTKFMSQNRDLMEGSWLDKIIWEEQGRPMMKSKLIFDLQDDKMHFEVLDNKDGTHLRVHAGAMILTHSLKSSSVDSSEQPGHGVQYGWRYVANDKHYSNRKTSQQLKSNSKKRSAHGVKVFHSQPALKLQTMKLKLSNKDIANFHRPKALWYPHDSGVTVKEQGKLPTHRPMKIIIKSLGGKGSKLHVDAEETLSSVKAKASKKLDFKGSETVKLYYLGRELEDHKSLAAQNVKPNSLIHLVRTKIHLWPRAQRVPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNVGMGARLCTYYQKCSPDDQSGSLLRNTDSSLGHIISLDPADKSPFIGDLKPGCSQSSLETNMYRAPIFPHKVPLTDYLLIRSAKGKLSLRRIDKINVVGQQEPLMEVLSPGSKNFQTYMMNRLLVQMCREFQAAEKRRLPPYIRIDELLSQFPYLSEASFRKKIKEYGNLQRGANGQSVLVKKRNFRMWSEDELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTHISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTSQGKENIERMEITGVGDPSGRGMGFSYARAPPKAPVSNAMVKKKAATRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEIIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQAQSLSAINGDENESDSEGNSDLDSFAGDLENLLDAEECEEGDEGTNDLKRDKGDGVKGLKMRRHPTLAQAEEEIEDEAAEAAELRRLLMDDVEADRKKKKKARVVVDEARLIPKLRPKFIFDNTEQVKQIANTLQLDGANHFREDSIAELREEENFPAKKSKTMKANKAKKNDITPISVPNKKIKLNMGEGIKNQVFKEKKPSRETFVCGACGQLGHMRTNKNCPKYGEDLEAQLESTDIEKSGKSIFVDPSSQSQHKAPSRRSISKSSTKIAPVDNSTKIPLKFKCSSTEKSSDKPAIEIFQSSDKPVTSDSETAKSAKVNKIIIPSKVKPDDTQAESLKHAIVIRPPADSGRGLADSHKFPIKIRSSTEIDREQSHKKIIIKRTKEVVDLELDSPVASAGLEHRKTKRIVELSNFEKYSRQETVYSTEGLVKWKGNEDRRWWEEQEKRRNEVRLREDRARRHHKDEIRMLKEQERLDELKRYEEDIRREREEEEQQKAKKKKKKKKHDFRDDYLDDPRSRRYDKRMLERDRSGKRRSAELGNIGVDIMPPTKRRRGGGGEVGLANILEGIVDVLVKDRHDLSYLFQKPVSKKEAPDYFDIIERPMDLSRIRERVRNMEYKSREDFRHDIWQITYNAHKYNNGRNPGIPPLADRLLEYSDYLLNENDDNLTAAEAGIENKDF* 1888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0731 1887 MobiDBLite consensus disorder prediction 1693 1741 - -
Lja2g0731 1887 MobiDBLite consensus disorder prediction 1500 1521 - -
Lja2g0731 1887 ProSiteProfiles Bromodomain profile. 1783 1853 IPR001487 GO:0005515
Lja2g0731 1887 SUPERFAMILY Ubiquitin-like 640 740 IPR029071 -
Lja2g0731 1887 MobiDBLite consensus disorder prediction 66 121 - -
Lja2g0731 1887 MobiDBLite consensus disorder prediction 1 28 - -
Lja2g0731 1887 Pfam Bromodomain 1784 1849 IPR001487 GO:0005515
Lja2g0731 1887 Gene3D - 22 68 IPR036741 -
Lja2g0731 1887 Gene3D - 1683 1886 IPR036427 GO:0005515
Lja2g0731 1887 Pfam TATA box-binding protein binding 19 61 IPR009067 -
Lja2g0731 1887 MobiDBLite consensus disorder prediction 139 205 - -
Lja2g0731 1887 Pfam Protein of unknown function (DUF3591) 590 1155 IPR022591 -
Lja2g0731 1887 Gene3D - 670 743 - -
Lja2g0731 1887 CDD Ubl_TAFs_like 670 741 - -
Lja2g0731 1887 SMART ubq_7 670 742 IPR000626 GO:0005515
Lja2g0731 1887 MobiDBLite consensus disorder prediction 471 492 - -
Lja2g0731 1887 SMART bromo_6 1762 1873 IPR001487 GO:0005515
Lja2g0731 1887 MobiDBLite consensus disorder prediction 1241 1261 - -
Lja2g0731 1887 PRINTS Bromodomain signature 1800 1816 IPR001487 GO:0005515
Lja2g0731 1887 PRINTS Bromodomain signature 1834 1853 IPR001487 GO:0005515
Lja2g0731 1887 PRINTS Bromodomain signature 1816 1834 IPR001487 GO:0005515
Lja2g0731 1887 PRINTS Bromodomain signature 1786 1799 IPR001487 GO:0005515
Lja2g0731 1887 MobiDBLite consensus disorder prediction 1247 1261 - -
Lja2g0731 1887 MobiDBLite consensus disorder prediction 1451 1477 - -
Lja2g0731 1887 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 15 1307 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Lja2g0731 1887 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1397 1884 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Lja2g0731 1887 SUPERFAMILY Bromodomain 1754 1874 IPR036427 GO:0005515
Lja2g0731 1887 MobiDBLite consensus disorder prediction 597 616 - -
Lja2g0731 1887 MobiDBLite consensus disorder prediction 1449 1477 - -
Lja2g0731 1887 ProSitePatterns Bromodomain signature. 1788 1845 IPR018359 -
Lja2g0731 1887 Coils Coil 1675 1714 - -
Lja2g0731 1887 Pfam Ubiquitin family 672 742 IPR000626 GO:0005515
Lja2g0731 1887 CDD Bromodomain 1772 1868 - -
Lja2g0731 1887 ProSiteProfiles Ubiquitin domain profile. 670 740 IPR000626 GO:0005515
Lja2g0731 1887 PANTHER BNAA01G26290D PROTEIN 15 1307 - -
Lja2g0731 1887 PANTHER BNAA01G26290D PROTEIN 1397 1884 - -
Lja2g0731 1887 SUPERFAMILY TAF(II)230 TBP-binding fragment 24 62 IPR036741 -
Lja2g0731 1887 Coils Coil 1271 1291 - -
Lja2g0731 1887 MobiDBLite consensus disorder prediction 1714 1741 - -
Lja2g0731 1887 MobiDBLite consensus disorder prediction 93 114 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0731 670 740 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 36.620 7.70e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0731 K03125 - gmx:100780733 3107.39