Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0730 ATGTCTCTCCTCAGCAGATTCTTCTACAAGAGACCCCCAGATGGCTTACTCGAATTCATCGAGAGAGTTTACGTCTTCGATTCATGCTTCTGCACCGAAGCATTACCCGACGGAATGTACCAGCTTTACCTTCACGAAATCGTCACCGAATTGCACGAAGAGTTTCCAGAATCTTCCTTTCTCGCCGTCAATTTTCGCGACGGCGGGAAGCGGAGCACCTTCGCCGAGATCCTCTGCGAGTTCGATGTGACGGTGATGGATTATCCGAAGCAGTACGAGGGTTGCCCTCTTCTGCCACTGTCTCTTGTTCAGCATTTCCTTCGCGTTTGTGAGAGTTGGCTTTCACTTGGGAACCACCAGAACGTGATCTTGTTCCACTGTGAGAGAGGTGGTTGGCCCCTCTTGGCGTCCCTTCTCGCTAGCTTCTTGATTTTCAGAAGGGTCCATAGTGGTGAGCGTAGAACCCTTGAAATGGTGCATAGAGAAGCACCTAAGGGTTTGTTGCAGTTGTTGTCACCGTTGAACCCTTTGCCTTCTCAGCTTCGTTACCTTCAGTATGTGGCAAGGAGGAACATTGCACCTGAGTGGCCACCACCTGAGCGAGCTTTGTCTCTGGATTGTGTCTTCCTTAGAGGGATTCCTGGTTTTGATTCGCAGAACGGGTGCCGACCCATGTTCAGGATTTTCGGCAGGAATTTGTTATCCAATGGTGGTCTTTCCACCCAGATGATTTACTCCATGCATAAGAAGAAGAAGACCTTGAGGCATTACCGCCAGGCGGACTGTGATGTGATTAAGATTGATATTCAGTGTTTAGTGCAAGGGGATGTGGTATTGGAGTGTGTTCATTTGGATTTGGATCCGGAGAGGGAAGTCATGATGTTTCGTGTGATGTTCAACACGGCTTTTATTCGATCCAACATATTGATGCTGAACTCTGAAAACCTGGACATTCTTTGGGATTCCAAGGAACGCTATCCAAAAGGCTTCCGGGCTGAGGTTTTGTTTGGGGAGGTTGATAGCATAAGTCCTCCAAGGGCTCCAACAACAACCATTTTAAATGGCGAGGAGAAAGGTGGATTGCCCATTGAAGCCTTTTCAAGAGTTCAAGAACTTTTTAGTGGCATAGAATGGGTTGACAGTGATGATGCTGCCGCCGTGTGGCTGCTTAAACAACTTACAGTCTTAAATGATGCCAAAGAGTTTTCAAGGTTGCAAGGTAAAGGAAGTTTGTATTCATCACCTGCTGACTCTGAAGAAGAAAATAATGAATCAAGCACTGCTGATAGTTCAGATGAGGCCTTCGATGTTATTCCCAAGTCTTCTGCTGATCCTTCAAAATTATTGATGTCGGATACCCCTGATTTGGTCCATATAACACCTGATCAGTCATTGGCTGAGAATGTTTCATCACCTCATCATGCTCCAAGTAAGGAATATTCACCTCTTTCATCTCCGTCATCACCTTCCGCAGTTCCGGCTATGCAACCTCTGCTTCCAACACCAGCACAAGCACCACCACCACCTCAGCTTCCAACTCCACCTCCATCATCTACCCCCATTCCACCTCCTCCAGAACCTGTGCGAACAAGCTCAGCTCTGCCACCTCCACCTCCACCACCTCCTCCTCCAGGTCGGACAGGTTTAGTGCCACCACCTCCACCCCCACCTCCACCACCTTCCTTAGGTTGTAACACTAATAATGCTACTATTCCGCCTCCACCTCCCATAGTTCACCACATTGTTGACAATGCTTCTACATTGCCACCACCGCCACCACCACCACCACCACCACCTCCTCCTCCTCTAGGTCATAATGTCAATAGTACCCCCATTCCACCTCCACCTCCTCCTCCTCCAGGTCGGACAGGTTTAGTGCCACCACCTCCACCCCCACCTCCACCTCAACCTTCTGGTTCTGTACGAGCAGGTTCAGCCCCACCTCCTCCACCTCCGCCTCCGCTAGGTCCGTCACGAACAAGTTCAACCCCACCGCCTCCACCTCCACCTCCTCCAGGTTCTACACGAATGAGTTCAGCCCCACCACCTCCACCTCCACCTCCTTCGGGTTCTACACGAACAGGTTCAGCCCCGCCACCTCCACCTCCACCTCCTTCAGGTTCTACACGAACAGGTTCAGCCCCGCCACCTCCACCTCCTCCGGGTGCACGAACAAGTTCAACTCCACCTCCGCCGCCAGCTCCTCCTGGACCTGTAAGGACTGGTTCAGCTCCACCTGCACCAAAGCCTCCAAGTGCTCCTCCTCCACCAAATGGTCGTGGTTCATCACCAGCGCCACCTCCACCTCCTGCAGCCAGGACTTCCTCTGTTGTGCCACCACCGCCAGGTAAACCTTCTTCAGTACCAGCAAATGTTGGAAGAGGTCGTGGGACTGCTAATGCTCCTAAGAAAACTTTGTTAAAGCCCCTACATTGGGTGAAAGTTGCTCGAGCAACACAAGGGAGTTTGTGGGCTGATTCACAGAAACAAGGCAATGTTTCAAGGGCTCCTGAAATTGATATATCGGAACTTGAGAGCCTGTTTTCAGCAGCATCAACTTCTGATGGGAGCAGTACTAAAGGTGGAGGTCGCCGTGGTTCTAATATTAACAAACCTGAGAAAATACAATTGGTTGATTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCCAAAATAAAAATTCCTTTGCCAGATATGCTTAATGCAATTCTGGCGTTGGATTCTTCTGTTCTGGATATTGATCAGGTTGAGAATCTCATCAAATTCTGTCCCACAAAGGAAGAGATGGAGATGTTGAAGAATTATACAGGGAACAAGGATATGCTTGGAAAGTGTGAGCAGTTTTTTATGGAGCTGATGAAGGTCCCACGAGTGGAATCCAAGTTAAGGGTGTTTGCTTTTAAAATAACCTTTAATACTCAGGTGAGCGATTTAAGGTTAAATTTGAACACAATCAATGGTGCAGCTAGAGAGGTGAAAGAATCTGGGAAATTGCGTCAGATAATGCAGACTATTCTTACTTTGGGCAATGCCCTGAATCAGGGAACTGCACGAGGATCAGCAGTAGGATTCAAGTTGGATAGCCTTCTTAAATTATCTGATACTCGTGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTGATTGCTGAGAAAATGCCCGAATTGCTAGATTTTGACAAGGATCTTGTCCATTTGGAAGCAGCTTCTAAGATCCAACTAAAAGCATTAGCTGAAGAAATGCAAGCGGTAAGCAAAGGTTTAGAGAAAGTTGAGCAGGAACTCAGTGCTTCTGAAAACGATGGAATTATATGTTCAGGATTTTGCAAGGTGTTGAAGAATTTTCTGCATACTGCCGAAGCTGACGTGAGGTCACTTACATCATTGTATTCTGAAGTGGGTAGAAGTGCAGATTCTTTGTCCCAGTACTTTGGGGAGGATCCAGCTAGGTGCCCCTTTGAACAAGTGACACAAATACTTGTTGTCTTTGTCAAGATGTTCAAGAAGTCAAGGGAGGAGAACGAAAAACAAGCAGATGCTGAGAAAAAGAAATTAGAAAAAGAAGCCATGAAGGAGAAGGCAGCAATTAACACGCATTCCAAAAAAGAGGGCGTTCGGTAA 3633 0.4748 MSLLSRFFYKRPPDGLLEFIERVYVFDSCFCTEALPDGMYQLYLHEIVTELHEEFPESSFLAVNFRDGGKRSTFAEILCEFDVTVMDYPKQYEGCPLLPLSLVQHFLRVCESWLSLGNHQNVILFHCERGGWPLLASLLASFLIFRRVHSGERRTLEMVHREAPKGLLQLLSPLNPLPSQLRYLQYVARRNIAPEWPPPERALSLDCVFLRGIPGFDSQNGCRPMFRIFGRNLLSNGGLSTQMIYSMHKKKKTLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNSENLDILWDSKERYPKGFRAEVLFGEVDSISPPRAPTTTILNGEEKGGLPIEAFSRVQELFSGIEWVDSDDAAAVWLLKQLTVLNDAKEFSRLQGKGSLYSSPADSEEENNESSTADSSDEAFDVIPKSSADPSKLLMSDTPDLVHITPDQSLAENVSSPHHAPSKEYSPLSSPSSPSAVPAMQPLLPTPAQAPPPPQLPTPPPSSTPIPPPPEPVRTSSALPPPPPPPPPPGRTGLVPPPPPPPPPPSLGCNTNNATIPPPPPIVHHIVDNASTLPPPPPPPPPPPPPPLGHNVNSTPIPPPPPPPPGRTGLVPPPPPPPPPQPSGSVRAGSAPPPPPPPPLGPSRTSSTPPPPPPPPPGSTRMSSAPPPPPPPPSGSTRTGSAPPPPPPPPSGSTRTGSAPPPPPPPGARTSSTPPPPPAPPGPVRTGSAPPAPKPPSAPPPPNGRGSSPAPPPPPAARTSSVVPPPPGKPSSVPANVGRGRGTANAPKKTLLKPLHWVKVARATQGSLWADSQKQGNVSRAPEIDISELESLFSAASTSDGSSTKGGGRRGSNINKPEKIQLVDLRRAYNCEIMLSKIKIPLPDMLNAILALDSSVLDIDQVENLIKFCPTKEEMEMLKNYTGNKDMLGKCEQFFMELMKVPRVESKLRVFAFKITFNTQVSDLRLNLNTINGAAREVKESGKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLIAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELSASENDGIICSGFCKVLKNFLHTAEADVRSLTSLYSEVGRSADSLSQYFGEDPARCPFEQVTQILVVFVKMFKKSREENEKQADAEKKKLEKEAMKEKAAINTHSKKEGVR* 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0730 1210 Coils Coil 1078 1105 - -
Lja2g0730 1210 SMART it6_source 476 1210 IPR015425 -
Lja2g0730 1210 MobiDBLite consensus disorder prediction 466 492 - -
Lja2g0730 1210 SUPERFAMILY Formin homology 2 domain (FH2 domain) 872 1198 - -
Lja2g0730 1210 MobiDBLite consensus disorder prediction 466 805 - -
Lja2g0730 1210 MobiDBLite consensus disorder prediction 408 453 - -
Lja2g0730 1210 Gene3D Formin, FH2 domain 797 1183 IPR042201 -
Lja2g0730 1210 Coils Coil 1172 1206 - -
Lja2g0730 1210 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 20 187 IPR029021 -
Lja2g0730 1210 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Lja2g0730 1210 PANTHER FORMIN-J 600 1206 - -
Lja2g0730 1210 PANTHER FORMIN-J 1 572 - -
Lja2g0730 1210 Gene3D - 197 342 - -
Lja2g0730 1210 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Lja2g0730 1210 MobiDBLite consensus disorder prediction 586 787 - -
Lja2g0730 1210 MobiDBLite consensus disorder prediction 493 579 - -
Lja2g0730 1210 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Lja2g0730 1210 MobiDBLite consensus disorder prediction 1173 1210 - -
Lja2g0730 1210 ProSiteProfiles Formin homology-2 (FH2) domain profile. 797 1197 IPR015425 -
Lja2g0730 1210 SMART PTEN_C2_2 198 338 IPR014020 -
Lja2g0730 1210 Pfam Formin Homology 2 Domain 801 1172 IPR015425 -
Lja2g0730 1210 MobiDBLite consensus disorder prediction 849 865 - -
Lja2g0730 1210 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Lja2g0730 1210 MobiDBLite consensus disorder prediction 849 870 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0730 Lja-Chr2 6627863 6636880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0730 1 440 FH2 protein (formin) Gene Family AT1G31810 77.500 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0730 - - mtr:MTR_5g026645 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0730 2 6627863 6636880 Lja2g0730 2 6627863 6636880 ECH