Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0722 ATGTTCGGTGGTGGAGGTGACGATACCCTTGCGGCTCGCCTCGGCATGGTGATGCCGTCGATGGTGAATCCGTCAACATCGTCGATGATGTCCGGTGAGATGTCTGTGGCGCCGGTGAGGGAGGAGAGGGGTCCGTCTCAGCCTCAGTGGACCCAGCAGGAGACGAGGGAGTTCATAGCGATCAGGGCGGAGCTGGAGAGGGACTTCACTGCGTCGAAGCGGAACAAGACGCTTTGGGAGGTTGTGAGCTCCAAGATGAGGGAGAGAGGCTTCAGGAGAAGCCCTGAACAGTGCAAATGCAAGTGGAAGAACCTTGTCAATCGCTATAAGGGAAAAGAGACATCTGATCCAGAGCATGGCAAGCAATGCCCATTTTTTGAAGAATTGCATGCAGTTTTTACCCAAAGGGCACAGAACATGCAACGTTTGCTTCTTGAATCTGAAAATCGTTCAGCTCAAACAAAGAAAGGGATGAAAAGGTTAAGTGGGGATCGATCCTCAGAAGAATTCTCAGAAGATGATGAGGTTGGAGATGAGAGCGAAGAGGAGAGACCTGCCAGAAGCAATACCCGCAAAAGGAAAGCTTCTGACAAAACTGCAATGGAGAAGTCTTCAAAGGGGAACAATCCAGGTAATAATACTAATAGTGCTAGTATTCAGGAAATGCTCAAGGAATTTTTCCAGCACCAGCTAAGGATGGAAATGCAGTGGAGGGAGATGATGGAAAGGCGTGCACATGAACGACAATTGTTTGAGCAAGAATGGCGGCAGACAATGGAAAAGCTTGAGAGGGAGAGATTAATGGTTGAACAGGCATGGAGGGAGAGAGAAGAACAAAGGAGAATAAGAGAAGAGAATAGGGCAGAGAGGAGGGATGCATTGTTGACGACCCTTTTAAACAAACTCATTCATGAATCTAACTAA 924 0.4827 MFGGGGDDTLAARLGMVMPSMVNPSTSSMMSGEMSVAPVREERGPSQPQWTQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGKQCPFFEELHAVFTQRAQNMQRLLLESENRSAQTKKGMKRLSGDRSSEEFSEDDEVGDESEEERPARSNTRKRKASDKTAMEKSSKGNNPGNNTNSASIQEMLKEFFQHQLRMEMQWREMMERRAHERQLFEQEWRQTMEKLERERLMVEQAWREREEQRRIREENRAERRDALLTTLLNKLIHESN* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0722 307 PANTHER - 46 305 - -
Lja2g0722 307 CDD GT1 48 113 - -
Lja2g0722 307 MobiDBLite consensus disorder prediction 202 216 - -
Lja2g0722 307 MobiDBLite consensus disorder prediction 23 54 - -
Lja2g0722 307 Gene3D - 50 111 - -
Lja2g0722 307 MobiDBLite consensus disorder prediction 181 201 - -
Lja2g0722 307 Pfam Myb/SANT-like DNA-binding domain 48 131 IPR044822 -
Lja2g0722 307 Coils Coil 252 272 - -
Lja2g0722 307 ProSiteProfiles Myb-like domain profile. 50 106 IPR001005 -
Lja2g0722 307 MobiDBLite consensus disorder prediction 146 216 - -
Lja2g0722 307 SMART sant 46 108 IPR001005 -
Lja2g0722 307 PANTHER - 46 305 - -
Lja2g0722 307 MobiDBLite consensus disorder prediction 152 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0722 Lja-Chr2 6564293 6566760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0722 44 302 Trihelix Transcription Factor Family AT2G38250 42.593 6.36e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lja2g0722 Myb_DNA-bind_4 1.2e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0722 - - gmx:100812635 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0722 2 6564293 6566760 Lja2g0722 2 6564293 6566760 ECH