Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0719 ATGGGCATTTGTCTGATAAAATGGCAATGGCTGTGGCGGCTTCTTTTTGTTTCGCTGATACATGTTGTAACTTATAAAAGTGAAGCAACCAGTCCTGATGGTGAGGTACTTCTCAGCTTCAGGACAGCAGTTGTTAATTCTGATGGTTTAGGATGGAGGCCAGAGGAGCCGAACCCGTGTAAATGGAAGGGAGTGAAATGTGATCCAAAAACCAAGAGAGTAACGCATCTGAGTCTATCTCACCGTAGGTTAAGTGGCTCTTTATCACCTGACCTTGGGAAGCTAGAGCATCTGAGAGTTCTTGCTCTTCATAACAACAACTTCTATGGGAAAATTCCATCAGAATTGGGAAATTGCACTGAATTGGAAGGAATATTTTTACAGGGCAATTACCTTGGTGGAATGATTCCAAGTGAAATAGGAAACCTTTCACAGCTTCAAAATTTGGATTTATCAAGCAATTCCCTTGATGGGAATATTCCAGCATCACTTGGGAAGTTGGAGAACCTCAAATACTTTAATGTATCAGCCAATTTTCTGGTCGGACCAATACCTTCGGACGGTATCCTTGCCAAATTTGCTGGAAGCTCCTTTGTTGGAAATCGCGGTTTGTGTGGAGCGCAAATCAGTTCAACATGTAAAGATGGCTCGCCTGGGACAAATACATCTAATTCCTCGGATTCAAATCAAAATGGAAAGAAGAAATATTCTGGCCGGCTGCTCATCAGTGCATCAGCAACTGTGGGTGCACTACTTTTGGTGGCACTAATGTGTTTCTGGGGTTGTTTTCTTTATAAAAAGTTTGGTAAAAATGATAGAATAAGTCTGGCAATGGATGTCGGTGCAGGTGCTTCAATAGTGATGTTTCATGGAGACCTACCATATTCTTCGAAAGACATTATTAAGAAACTAGAGACTTTGAATGAGGAACATATAATAGGGGTAGGGGGATTTGGAACCGTTTACAAGCTTGCAATGGATGACGGCAATGTATTTGCTTTGAAAAGGATTGTAAAGTTGAATGAGGGCTTTGATCGTTTTTTTGAGAGGGAGCTTCAAATTCTTGGTAGCATCAAACACCGTTACCTAGTGAACTTACGAGGATATTGCAATTCACCTACGTCAAAGTTGTTAATATATGACTACCTACCTGGTGGTAGTCTCGATGAAGTTCTTCATGAAAGATCTGAGCAACTAGACTGGGATTCACGCTTAAATATAATAATGGGGGCTGCAAAAGGGCTGTCGTACTTACACCATGATTGTTCCCCTAGAATCATACACCGAGATATAAAATCGAGCAACATTTTACTTGATGGAAAATTGGATGCTCGGGTCTCAGATTTTGGACTTGCAAAACTTCTGGAGGATGAAGAATCTCACATCACCACAATTGTTGCTGGGACATTTGGTTATCTTGCTCCAGAGTATATGCAAAGTGGCAGAGCAACTGAGAAGACTGATGTGTATAGTTTTGGTGTGCTGACACTTGAAGTGCTGAGTGGAAAGCGGCCAACAGATGCATCGTTCATTGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTTCTTATTACGGAAAATAGGGCGAGGGAAATTGTGGATCCACTGTGTGAGGGGGTGCAGGTAGACAGCCTTGATGCCTTGCTCACTATGGCGATTCAGTGTGTTTCCTCAAGTCCAGAGGATCGACCCACGATGCACCGAGTGGTCCAGTTGCTAGAATCGGAGGTCGTAACTCCATGCCCAAGTGACTTCTATGATTCCGACTAG 1773 0.4247 MGICLIKWQWLWRLLFVSLIHVVTYKSEATSPDGEVLLSFRTAVVNSDGLGWRPEEPNPCKWKGVKCDPKTKRVTHLSLSHRRLSGSLSPDLGKLEHLRVLALHNNNFYGKIPSELGNCTELEGIFLQGNYLGGMIPSEIGNLSQLQNLDLSSNSLDGNIPASLGKLENLKYFNVSANFLVGPIPSDGILAKFAGSSFVGNRGLCGAQISSTCKDGSPGTNTSNSSDSNQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRISLAMDVGAGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGVGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELQILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEVLHERSEQLDWDSRLNIIMGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGKLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLTLEVLSGKRPTDASFIEKGLNIVGWLNFLITENRAREIVDPLCEGVQVDSLDALLTMAIQCVSSSPEDRPTMHRVVQLLESEVVTPCPSDFYDSD* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0719 590 SUPERFAMILY Protein kinase-like (PK-like) 292 574 IPR011009 -
Lja2g0719 590 PANTHER RECEPTOR-LIKE PROTEIN 55 3 588 - -
Lja2g0719 590 Gene3D Ribonuclease Inhibitor 31 215 IPR032675 -
Lja2g0719 590 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 3 588 IPR031071 GO:0004672|GO:0005524|GO:0030244
Lja2g0719 590 ProSiteProfiles Protein kinase domain profile. 307 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0719 590 Pfam Protein kinase domain 309 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0719 590 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Lja2g0719 590 MobiDBLite consensus disorder prediction 213 232 - -
Lja2g0719 590 Gene3D Phosphorylase Kinase; domain 1 280 382 - -
Lja2g0719 590 SUPERFAMILY L domain-like 50 186 - -
Lja2g0719 590 ProSitePatterns Protein kinases ATP-binding region signature. 313 339 IPR017441 GO:0005524
Lja2g0719 590 Gene3D Transferase(Phosphotransferase) domain 1 383 580 - -
Lja2g0719 590 SMART serkin_6 307 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0719 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0719 Lja-Chr2 6542649 6554047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0719 1 583 Receptor kinase-like Gene Family AT2G35620 75.726 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lja2g0719 Pkinase 6.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0719 - - gmx:100819230 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0719 2 6542649 6554047 Lja2g0719 2 6542649 6554047 ECH